RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MAGEA1P43355 309 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 STXBP1P61764 594 aaKnown RBP2.96□□□□□ -1.94
LINC00560-201ENST00000564593 SNRPFP62306 86 aaKnown RBP2.96□□□□□ -1.94
LINC00560-201ENST00000564593 LIPEQ05469 1076 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 GINS1Q14691 196 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 SF3A2Q15428 464 aaKnown RBP2.96□□□□□ -1.94
LINC00560-201ENST00000564593 NCCRP1Q6ZVX7 275 aaPredicted RBP2.96□□□□□ -1.94
LINC00560-201ENST00000564593 SCD5Q86SK9 330 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 C12orf56Q8IXR9 622 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 OR10G4Q8NGN3 311 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 OR10J6PQ8NGY7 276 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 AGR3Q8TD06 166 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 STARD8Q92502 1023 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 DNAJC1Q96KC8 554 aaKnown RBP2.96□□□□□ -1.94
LINC00560-201ENST00000564593 RHOXF2Q9BQY4 288 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 C11orf70Q9BRQ4 267 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 EXO5Q9H790 373 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 NOX3Q9HBY0 568 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 SLC40A1Q9NP59 571 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 LHX9Q9NQ69 397 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 TBX21Q9UL17 535 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 MN1Q10571 1320 aaPredicted RBP2.96□□□□□ -1.94
LINC00560-201ENST00000564593 LRRIQ4A6NIV6 560 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 MIF4GDA9UHW6 222 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 SNAI2O43623 268 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 CYTH3O43739 400 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 HUS1O60921 280 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 GABARAPO95166 117 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 RETP07949 1114 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 DCKP27707 260 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 GPX4P36969 197 aaPredicted RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 UQCRFS1P47985 274 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 CSNK1EP49674 416 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 PPOXP50336 477 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 MNAT1P51948 309 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 EIF3EP60228 445 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 VSNL1P62760 191 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 EXOC3L4Q17RC7 722 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 TTC23LQ6PF05 361 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 UBL4BQ8N7F7 174 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 TSEN15Q8WW01 171 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 CAPSLQ8WWF8 208 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 ECHDC3Q96DC8 303 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 DYNLL2Q96FJ2 89 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 ISYNA1Q9NPH2 558 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 LYARQ9NX58 379 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 CCDC59Q9P031 241 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 OR12D3Q9UGF7 316 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 PSG8Q9UQ74 426 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 UTP11Q9Y3A2 253 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 ASTN1O14525 1302 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 SIPA1L1O43166 1804 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 BRWD3Q6RI45 1802 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 COL4A1P02462 1669 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 SSC5DA1L4H1 1573 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 TRBV9A0A0B4J1U6 114 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 IGHV3-66A0A0C4DH42 116 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 LYRM9A8MSI8 78 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 M0QX08 132 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 WRBO00258 174 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 NUPL2O15504 423 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 EIF4E2O60573 245 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 SHOX2O60902 331 aaPredicted RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 DNAJB6O75190 326 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 GOLGA8HP0CJ92 632 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 RAB3BP20337 219 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 BCKDHBP21953 392 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 F2RP25116 425 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 CASP1P29466 404 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 RND2P52198 227 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 MAB21L1Q13394 359 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 OR7A5Q15622 319 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 DEFB116Q30KQ4 102 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 ZCWPW2Q504Y3 356 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 THEM4Q5T1C6 240 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 DNAJC24Q6P3W2 148 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 WDR59Q6PJI9 974 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 ZFP2Q6ZN57 461 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 FAM92BQ6ZTR7 304 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 CMC1Q7Z7K0 106 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 TMEM150AQ86TG1 271 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 OR52K1Q8NGK4 314 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 OR2A1Q8NGT9 310 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 LYPD6BQ8NI32 183 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 NRGNQ92686 78 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 CAPZA3Q96KX2 299 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 MBOAT7Q96N66 472 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 SLC25A2Q9BXI2 301 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 NSRP1Q9H0G5 558 aaKnown RBP2.95□□□□□ -1.94
LINC00560-201ENST00000564593 VCXQ9H320 206 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 PARVGQ9HBI0 331 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 TMEM165Q9HC07 324 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 GGA2Q9UJY4 613 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 PSME2Q9UL46 239 aa2.95□□□□□ -1.94
LINC00560-201ENST00000564593 ADAMTSL1Q8N6G6 1762 aa2.94□□□□□ -1.94
LINC00560-201ENST00000564593 DOCK1Q14185 1865 aa2.94□□□□□ -1.94
LINC00560-201ENST00000564593 IGKV6D-21A0A0A0MT36 114 aa2.94□□□□□ -1.94
LINC00560-201ENST00000564593 ARPC4-TTLL3A0A0A6YYG9 625 aa2.94□□□□□ -1.94
LINC00560-201ENST00000564593 IGHV3-74A0A0B4J1X5 117 aa2.94□□□□□ -1.94
LINC00560-201ENST00000564593 IGHV5-51A0A0C4DH38 117 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms