RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 DLX2Q07687 328 aaPredicted RBP17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 BATFQ16520 125 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 MRPL52Q86TS9 123 aaKnown RBP17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 OR4K13Q8NH42 304 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 ZNF417Q8TAU3 575 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 SMARCD2Q92925 531 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 CCDC74AQ96AQ1 378 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 RARRES2Q99969 163 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 PRSS27Q9BQR3 290 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 PARD6GQ9BYG4 376 aaPredicted RBP17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 PRSS16Q9NQE7 514 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 SERINC1Q9NRX5 453 aa17.13■□□□□ 0.33
SEMA4B-215ENST00000560089 OR2AG2A6NM03 316 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 TRDCB7Z8K6 153 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 GAPDHP04406 335 aaKnown RBP17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 NCBP2P52298 156 aaKnown RBP eCLIP17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 HYAL1Q12794 435 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 LEMD1Q68G75 181 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 OR4C11Q6IEV9 310 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 SFTPA1Q8IWL2 248 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 ZNF480Q8WV37 535 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 HLA-CQ95604 372 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 GSKIPQ9P0R6 139 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 H0YL77 283 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 CIDEAO60543 219 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 SOCS5O75159 536 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 SCGNO76038 276 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 KLK2P20151 261 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 H3F3AP84243 136 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 POM121L1PQ3SYA9 428 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 HIKESHIQ53FT3 197 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 OR52N4Q8NGI2 321 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 TMEM106AQ96A25 262 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 TIFAQ96CG3 184 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 BPIFA2Q96DR5 249 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 WDR34Q96EX3 536 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 CCDC74BQ96LY2 380 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 C5orf34Q96MH7 638 aa17.12■□□□□ 0.33
SEMA4B-215ENST00000560089 CEACAM8P31997 349 aaPredicted RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 OPN5Q6U736 354 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 Q6ZVU0 165 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 C11orf42Q8N5U0 333 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 OR4K15Q8NH41 348 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 OR11A1Q9GZK7 315 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 GSX1Q9H4S2 264 aaPredicted RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 SLC17A5Q9NRA2 495 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 RAB22AQ9UL26 194 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 A0A1B0GVT2 93 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 SERPINA2P20848 420 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 SLC37A1P57057 533 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 RNF151Q2KHN1 245 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 PRAMEF8Q5VWM4 474 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 PRAMEF7Q5VXH5 474 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 NXPE4Q6UWF7 544 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 KIRREL2Q6UWL6 708 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 PRR13Q9NZ81 148 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 ZNF107Q9UII5 783 aaPredicted RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 FOXD3Q9UJU5 478 aaPredicted RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 KIR2DL5BA0A0G2JN68 375 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 KIR2DL5BA0A0G2JPC4 375 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 TRBV5-5A0A0J9YX44 114 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 TLCD2A6NGC4 264 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 DNAJB6O75190 326 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 C1QL1O75973 258 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 IL6RP08887 468 aaPredicted RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 GSTP1P09211 210 aaKnown RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 RPL12P30050 165 aaKnown RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 KIR2DL5AQ8N109 375 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 LILRA3Q8N6C8 439 aaPredicted RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 OR6K6Q8NGW6 343 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 METTL8Q9H825 291 aaKnown RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 RAB18Q9NP72 206 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 USP36Q9P275 1121 aaKnown RBP17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 ZFP30Q9Y2G7 519 aa17.11■□□□□ 0.33
SEMA4B-215ENST00000560089 MED19A0JLT2 244 aaPredicted RBP17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 PLRG1O43660 514 aaKnown RBP17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 FCGR2CP31995 323 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 GGTLC2Q14390 218 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 SLC9A3R2Q15599 337 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 RAB30Q15771 203 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 CXorf40AQ8TE69 158 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 ANKRD9Q96BM1 317 aaPredicted RBP17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 OR4C45A6NMZ5 311 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 PRR32B1ATL7 298 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 POLR2HP52434 150 aaKnown RBP17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 MDGA2Q7Z553 956 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 ADIPOR2Q86V24 386 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 OIT3Q8WWZ8 545 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 OR10C1Q96KK4 312 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 OR7D2Q96RA2 312 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 GRHPRQ9UBQ7 328 aa17.1■□□□□ 0.33
SEMA4B-215ENST00000560089 FITM1A5D6W6 292 aa17.09■□□□□ 0.33
SEMA4B-215ENST00000560089 FGF5P12034 268 aa17.09■□□□□ 0.33
SEMA4B-215ENST00000560089 MDKP21741 143 aaPredicted RBP17.09■□□□□ 0.33
SEMA4B-215ENST00000560089 AK4P27144 223 aaPredicted RBP17.09■□□□□ 0.33
SEMA4B-215ENST00000560089 PPP1CCP36873 323 aaKnown RBP17.09■□□□□ 0.33
SEMA4B-215ENST00000560089 CLDN2P57739 230 aa17.09■□□□□ 0.33
SEMA4B-215ENST00000560089 COL9A2Q14055 689 aaPredicted RBP17.09■□□□□ 0.33
SEMA4B-215ENST00000560089 FAM220AQ7Z4H9 259 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms