RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CENPOQ9BU64 300 aa12.85□□□□□ -0.35
VPS18-202ENST00000558474 C1QTNF6Q9BXI9 259 aa12.85□□□□□ -0.35
VPS18-202ENST00000558474 FOXJ3Q9UPW0 622 aa12.85□□□□□ -0.35
VPS18-202ENST00000558474 STARD10Q9Y365 291 aa12.85□□□□□ -0.35
VPS18-202ENST00000558474 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
VPS18-202ENST00000558474 hCG_38984A0A1B0GV85 526 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 TUBAL3A6NHL2 446 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 FSTP19883 344 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 NR4A1P22736 598 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 MAP2K3P46734 347 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 MTNR1BP49286 362 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
VPS18-202ENST00000558474 OR8B8Q15620 311 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 FOXB2Q5VYV0 432 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 C22orf42Q6IC83 251 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 TPRA1Q86W33 373 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 SERPINA12Q8IW75 414 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 ZNF101Q8IZC7 436 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 OR51A4Q8NGJ6 313 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 TMEM106AQ96A25 262 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 TRMT61AQ96FX7 289 aaKnown RBP12.84□□□□□ -0.35
VPS18-202ENST00000558474 ESRP2Q9H6T0 727 aaKnown RBP12.84□□□□□ -0.35
VPS18-202ENST00000558474 CKLFQ9UBR5 152 aa12.84□□□□□ -0.35
VPS18-202ENST00000558474 KLF2Q9Y5W3 355 aaPredicted RBP12.84□□□□□ -0.35
VPS18-202ENST00000558474 TMEM127O75204 238 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 ALX3O95076 343 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 NGFP01138 241 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 IL1AP01583 271 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 RAC2P15153 192 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 SELEP16581 610 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 MYL9P24844 172 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 CALCRP30988 508 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 THBS4P35443 961 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 PPP1CBP62140 327 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 FAM3AP98173 230 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 ZNF92Q03936 586 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 RIPPLY1Q0D2K3 151 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 GK2Q14410 553 aaPredicted RBP12.83□□□□□ -0.36
VPS18-202ENST00000558474 HSD17B12Q53GQ0 312 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 RFPL4BQ6ZWI9 263 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 PGAP1Q75T13 922 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 MRPL21Q7Z2W9 205 aaKnown RBP12.83□□□□□ -0.36
VPS18-202ENST00000558474 WFDC8Q8IUA0 241 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 FTMTQ8N4E7 242 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 CSNK2A3Q8NEV1 391 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 NUP37Q8NFH4 326 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 SEMA6DQ8NFY4 1073 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 OR5D14Q8NGL3 314 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 OR13C5Q8NGS8 318 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 OR10AC1Q8NH08 325 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 SLITRK2Q9H156 845 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 PLEKHA1Q9HB21 404 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 NOX4Q9NPH5 578 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 HIVEP3Q5T1R4 2406 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 PCNX1Q96RV3 2341 aa12.83□□□□□ -0.36
VPS18-202ENST00000558474 PDCD5O14737 125 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 CASKO14936 926 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 GOSR1O95249 250 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 ZNF20P17024 532 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 SRMP19623 302 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 CALRP27797 417 aaKnown RBP12.82□□□□□ -0.36
VPS18-202ENST00000558474 GLRXP35754 106 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 GSK3AP49840 483 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 PSMD7P51665 324 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 VBP1P61758 197 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 NCS1P62166 190 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 LSM3P62310 102 aaKnown RBP12.82□□□□□ -0.36
VPS18-202ENST00000558474 GFOD2Q3B7J2 385 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 BEX5Q5H9J7 111 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 NCMAPQ5T1S8 102 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 MBNL2Q5VZF2 373 aaKnown RBP12.82□□□□□ -0.36
VPS18-202ENST00000558474 UTS2BQ765I0 119 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 CROCCP3Q8IVE0 287 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 OR1J1Q8NGS3 322 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 OR2AE1Q8NHA4 323 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 FAM71F1Q96KD3 344 aaPredicted RBP12.82□□□□□ -0.36
VPS18-202ENST00000558474 TECTBQ96PL2 329 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 NPDC1Q9NQX5 325 aaPredicted RBP12.82□□□□□ -0.36
VPS18-202ENST00000558474 SNTG1Q9NSN8 517 aa12.82□□□□□ -0.36
VPS18-202ENST00000558474 MEGF11A6BM72 1044 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 C5orf63A6NC05 138 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 DPRXA6NFQ7 191 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 PIN1P1O15428 100 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 IGFBP3P17936 291 aaPredicted RBP12.81□□□□□ -0.36
VPS18-202ENST00000558474 IGFBP2P18065 325 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 ANOS1P23352 680 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 GRNP28799 593 aaKnown RBP12.81□□□□□ -0.36
VPS18-202ENST00000558474 GNALP38405 381 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 RANBP1P43487 201 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 SOX2P48431 317 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
VPS18-202ENST00000558474 INSL4Q14641 139 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 ZNF718Q3SXZ3 478 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 ZNF529Q6P280 563 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 FGGYQ96C11 551 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms