RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ST3GAL3Q11203 375 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 ECH1Q13011 328 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 PIN1Q13526 163 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 GK2Q14410 553 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 KCNMB1Q16558 191 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 KRT71Q3SY84 523 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 TEX36Q5VZQ5 186 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 PGM2L1Q6PCE3 622 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 COLCA1Q6ZS62 124 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 MRPL21Q7Z2W9 205 aaKnown RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 OAFQ86UD1 273 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 TSPYL5Q86VY4 417 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 FAM90A1Q86YD7 464 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 FUNDC1Q8IVP5 155 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 Q8N7P7 452 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 OR9Q1Q8NGQ5 310 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 ACOT11Q8WXI4 607 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 DPF1Q92782 380 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 TNFRSF14Q92956 283 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 TAMM41Q96BW9 452 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 CCL13Q99616 98 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 CDCA4Q9BXL8 241 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 GPR61Q9BZJ8 451 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 PRSS22Q9GZN4 317 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 HDHD2Q9H0R4 259 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 IKZF5Q9H5V7 419 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 METTL8Q9H825 291 aaKnown RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 WDR76Q9H967 626 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 RNPEPL1Q9HAU8 725 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 C14orf119Q9NWQ9 140 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 CCDC167Q9P0B6 97 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 ZMAT5Q9UDW3 170 aaKnown RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 PRPF19Q9UMS4 504 aaKnown RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 COA3Q9Y2R0 106 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 POLR1DQ9Y2S0 133 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 U3KQK5 164 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 TRAV27A0A087WT01 109 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 TRBV23-1A0A0A0MS06 115 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 ADARB2-AS1A8MUL3 147 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 EFCAB9A8MZ26 197 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 H0YAE9 185 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 H7C1C5 153 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 F2RL2O00254 374 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 SNNO75324 88 aaPredicted RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 FCN3O75636 299 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 ZFPL1O95159 310 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 IFNA14P01570 189 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 PF4P02776 101 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 ALDOBP05062 364 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 CD14P08571 375 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 H2AFB1P0C5Y9 115 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 H2AFB2P0C5Z0 115 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 ACSM4P0C7M7 580 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 CTLA4P16410 223 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 CRABP1P29762 137 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 TGM4P49221 684 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 TPTEP56180 551 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 LGALS4P56470 323 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 KRTAP10-11P60412 298 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 LCN6P62502 163 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 HIST1H3AP68431 136 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 HOXA4Q00056 320 aaPredicted RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 CD83Q01151 205 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 PRKCDQ05655 676 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 KLRD1Q13241 179 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 IKZF1Q13422 519 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 MPP2Q14168 576 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 RSPO1Q2MKA7 263 aaPredicted RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 ZBED5Q49AG3 693 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 AGKQ53H12 422 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 ARSJQ5FYB0 599 aaPredicted RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 RABL3Q5HYI8 236 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 ATPAF1Q5TC12 328 aaPredicted RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 HIST2H3PS2Q5TEC6 136 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 CRIP3Q6Q6R5 217 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 EPGNQ6UW88 154 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 DLEU7Q6UYE1 221 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 ZNF826PQ6ZT77 177 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 HIST2H3AQ71DI3 136 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 CCDC80Q76M96 950 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 MAVSQ7Z434 540 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 TSEN54Q7Z6J9 526 aaKnown RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 PIGWQ7Z7B1 504 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 IQCF2Q8IXL9 164 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 MICU2Q8IYU8 434 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 RNF113BQ8IZP6 322 aaKnown RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 Q8N2B8 174 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 PNKDQ8N490 385 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 GCSAMQ8N6F7 178 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 OR5D13Q8NGL4 314 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 OR2AJ1Q8NGZ0 328 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 C8orf46Q8TAG6 207 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 C17orf50Q8WW18 174 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 LZICQ8WZA0 190 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 H1FXQ92522 213 aaKnown RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 RORBQ92753 470 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 C12orf43Q96C57 262 aaKnown RBP4.21□□□□□ -1.74
SPG11-208ENST00000558155 MED30Q96HR3 178 aa4.21□□□□□ -1.74
SPG11-208ENST00000558155 Q96M85 177 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms