RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 KIR3DL2P43630 455 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 PPP1CBP62140 327 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 FBXW12Q6X9E4 464 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 CEACAM19Q7Z692 300 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 TPRA1Q86W33 373 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 SERPINA12Q8IW75 414 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 ZFP41Q8N8Y5 198 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 PLPP7Q8NBV4 271 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 SEMA6DQ8NFY4 1073 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 KBTBD8Q8NFY9 601 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 OR1J1Q8NGS3 322 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 OR13C3Q8NGS6 347 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 OR51E1Q8TCB6 317 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
TPM1-209ENST00000558072 SGK3Q96BR1 496 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 ZC3HAV1LQ96H79 300 aaKnown RBP10.72□□□□□ -0.69
TPM1-209ENST00000558072 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
TPM1-209ENST00000558072 SLC22A4Q9H015 551 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 GPR84Q9NQS5 396 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 CGGBP1Q9UFW8 167 aaPredicted RBP10.72□□□□□ -0.69
TPM1-209ENST00000558072 RSL24D1Q9UHA3 163 aaKnown RBP10.72□□□□□ -0.69
TPM1-209ENST00000558072 ENPP5Q9UJA9 477 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 SIRT4Q9Y6E7 314 aaPredicted RBP10.72□□□□□ -0.69
TPM1-209ENST00000558072 HCFC1P51610 2035 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 GGT3PA6NGU5 568 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 P2RY10O00398 339 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 GABRPO00591 440 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 ALX3O95076 343 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 THBDP07204 575 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 GADD45AP24522 165 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 THBS4P35443 961 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 TGFBR2P37173 567 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 CRYBB2P43320 205 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 RPS25P62851 125 aaKnown RBP10.71□□□□□ -0.69
TPM1-209ENST00000558072 PPP3R1P63098 170 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 MZT1Q08AG7 82 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 HSD17B12Q53GQ0 312 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 ZMAT1Q5H9K5 638 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 NCMAPQ5T1S8 102 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 RGS7BPQ6MZT1 257 aaPredicted RBP10.71□□□□□ -0.69
TPM1-209ENST00000558072 SLC22A25Q6T423 547 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 UNQ9370/PRO34162Q6UXP9 181 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 CROCCP3Q8IVE0 287 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 TMEM203Q969S6 136 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 TMIGD2Q96BF3 282 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 SPOCK3Q9BQ16 436 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 ZNF442Q9H7R0 627 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 TCF7L1Q9HCS4 588 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 ZNF275Q9NSD4 429 aaPredicted RBP10.71□□□□□ -0.69
TPM1-209ENST00000558072 POU2F3Q9UKI9 436 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 FOXJ3Q9UPW0 622 aa10.71□□□□□ -0.69
TPM1-209ENST00000558072 TRAV1-2A0A0B4J238 106 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 LOC100506127A0A0U1RQW1 187 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CLEC18AA5D8T8 446 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 DPPA5A6NC42 116 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 A6NHS1 94 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 ANKRD30BLA7E2S9 258 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 MAGEB3O15480 346 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 GPX5O75715 221 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 SC5DO75845 299 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CLDN1O95832 211 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CELA3BP08861 270 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 UCHL1P09936 223 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 OCMP0CE72 109 aaPredicted RBP10.7□□□□□ -0.7
TPM1-209ENST00000558072 CCL2P13500 99 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 WNT5AP41221 380 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 MTNR1BP49286 362 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 DOC2BQ14184 412 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 OR8B8Q15620 311 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 GFOD2Q3B7J2 385 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 SNAI3Q3KNW1 292 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 GLYATL3Q5SZD4 288 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 MBNL2Q5VZF2 373 aaKnown RBP10.7□□□□□ -0.7
TPM1-209ENST00000558072 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CLEC18BQ6UXF7 455 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 USP43Q70EL4 1123 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 NAA40Q86UY6 237 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 DMRTC2Q8IXT2 367 aaPredicted RBP10.7□□□□□ -0.7
TPM1-209ENST00000558072 PARP16Q8N5Y8 322 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CLEC18CQ8NCF0 446 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 PIGTQ969N2 578 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 TMEM106AQ96A25 262 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 HAVCR1Q96D42 359 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CHCHD6Q9BRQ6 235 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CYSLTR2Q9NS75 346 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 SNTG1Q9NSN8 517 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 TXNL4BQ9NX01 149 aaKnown RBP10.7□□□□□ -0.7
TPM1-209ENST00000558072 NPAP1Q9NZP6 1156 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 KCNN3Q9UGI6 736 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 STARD10Q9Y365 291 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 CMAHPQ9Y471 501 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 RNF115Q9Y4L5 304 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 V9GYS6 101 aa10.7□□□□□ -0.7
TPM1-209ENST00000558072 UBR5O95071 2799 aaPredicted RBP10.69□□□□□ -0.7
TPM1-209ENST00000558072 ZNF816-ZNF321PA0A0X1KG74 233 aa10.69□□□□□ -0.7
TPM1-209ENST00000558072 A0A1B0GTI1 187 aa10.69□□□□□ -0.7
TPM1-209ENST00000558072 hCG_38984A0A1B0GV85 526 aa10.69□□□□□ -0.7
TPM1-209ENST00000558072 ABCD4O14678 606 aa10.69□□□□□ -0.7
TPM1-209ENST00000558072 FSTP19883 344 aa10.69□□□□□ -0.7
TPM1-209ENST00000558072 PRKACBP22694 351 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms