RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 NAAAQ02083 359 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TSPAN31Q12999 210 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 SNTB2Q13425 540 aaKnown RBP4.01□□□□□ -1.77
ATXN3-243ENST00000556671 KRR1Q13601 381 aaKnown RBP4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TAF13Q15543 124 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TBC1D28Q2M2D7 210 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 PABPC1L2AQ5JQF8 200 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 ARMC4Q5T2S8 1044 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 GPR139Q6DWJ6 353 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 MZT2BQ6NZ67 158 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 SLC25A47Q6Q0C1 308 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 UGT2A3Q6UWM9 527 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 PAMR1Q6UXH9 720 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 NHLRC1Q6VVB1 395 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 Q6ZTC4 211 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TMEM179BQ7Z7N9 219 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 AQP12AQ8IXF9 295 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 MUC15Q8N387 334 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 ZNF611Q8N823 705 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 CYB561A3Q8NBI2 242 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 SLC30A7Q8NEW0 376 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 OR10G2Q8NGC3 310 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 OR51L1Q8NGJ5 315 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 OR1J2Q8NGS2 313 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 OR2AJ1Q8NGZ0 328 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 AKR7LQ8NHP1 331 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TEX47Q8TBZ9 253 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 MAGEE2Q8TD90 523 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-243ENST00000556671 LIPHQ8WWY8 451 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 POP5Q969H6 163 aaKnown RBP4.01□□□□□ -1.77
ATXN3-243ENST00000556671 PLEKHA8Q96JA3 519 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TSSK2Q96PF2 358 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 NMNAT3Q96T66 252 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 FEVQ99581 238 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 GPA33Q99795 319 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 DHRS9Q9BPW9 319 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 ALG12Q9BV10 488 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TEX12Q9BXU0 123 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 SYT4Q9H2B2 425 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 CXorf56Q9H5V9 222 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 SIAEQ9HAT2 523 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 RPRD1BQ9NQG5 326 aaKnown RBP4.01□□□□□ -1.77
ATXN3-243ENST00000556671 BEX4Q9NWD9 120 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-243ENST00000556671 VNN3Q9NY84 501 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 DNAJB9Q9UBS3 223 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 SLC7A8Q9UHI5 535 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 SIGLEC7Q9Y286 467 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 GRIP1Q9Y3R0 1128 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 AP4S1Q9Y587 144 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 TIMM10BQ9Y5J6 103 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 LYVE1Q9Y5Y7 322 aa4.01□□□□□ -1.77
ATXN3-243ENST00000556671 NOTCH2Q04721 2471 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 ARPC4-TTLL3A0A0A6YYG9 625 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 IGKV1D-43A0A0B4J1Z2 117 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 IGHV2OR16-5A0A0B4J2B6 119 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 A0A1W2PPW3 197 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 PRSS37A4D1T9 235 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 C5orf49A4QMS7 147 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 TVP23AA6NH52 213 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 RIIAD1A6NNX1 92 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 C12orf71A8MTZ7 269 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 G3V2T6 193 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 RHODO00212 210 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 NDUFS7O75251 213 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 IGF2P01344 180 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 IFNGP01579 166 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 SERPINA5P05154 406 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 GYPBP06028 91 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 SOD3P08294 240 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 ADRA2AP08913 450 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 CD99P14209 185 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 HIST1H1CP16403 213 aaKnown RBP4□□□□□ -1.77
ATXN3-243ENST00000556671 ZNF23P17027 643 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 ZNF26P17031 533 aaPredicted RBP4□□□□□ -1.77
ATXN3-243ENST00000556671 GSTM3P21266 225 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 MSR1P21757 451 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 PAX7P23759 505 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 FASP25445 335 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 STOMP27105 288 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 LOXP28300 417 aaPredicted RBP4□□□□□ -1.77
ATXN3-243ENST00000556671 CRABP1P29762 137 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 CALCRP30988 508 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 RAD52P43351 418 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 RFX2P48378 723 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 GSSP48637 474 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 SELENOVP59797 346 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 RPL15P61313 204 aaKnown RBP4□□□□□ -1.77
ATXN3-243ENST00000556671 PCBD1P61457 104 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 SNRPD2P62316 118 aaKnown RBP4□□□□□ -1.77
ATXN3-243ENST00000556671 PSG4Q00888 419 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 GINS1Q14691 196 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 MEP1BQ16820 701 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 IQCCQ4KMZ1 466 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 KLHL12Q53G59 568 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 MESTQ5EB52 335 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 Q5PR19 223 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 SPATA46Q5T0L3 261 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 TMEM236Q5W0B7 351 aa4□□□□□ -1.77
ATXN3-243ENST00000556671 FAM205BPQ63HN1 556 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms