RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 RABEP2Q9H5N1 569 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 A0A1W2PQ09 198 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 A0A1W2PRX2 142 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 PRKCDQ05655 676 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 MZT1Q08AG7 82 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 ACSM1Q08AH1 577 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 TRAP1Q12931 704 aaKnown RBP11.36□□□□□ -0.59
ACTN1-219ENST00000556432 PCK2Q16822 640 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 ZBED5Q49AG3 693 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 LRRC10Q5BKY1 277 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 TEX36Q5VZQ5 186 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 PGM2L1Q6PCE3 622 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 DNM1P34Q6PK57 102 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 CFAP77Q6ZQR2 320 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 FAM122BQ7Z309 247 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 CROCCP2Q86T23 111 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 NAA40Q86UY6 237 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 LINC00346Q8IVM7 164 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 LRRC29Q8WV35 223 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 C17orf50Q8WW18 174 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 ATF6BQ99941 703 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 CITED2Q99967 270 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-219ENST00000556432 OCSTAMPQ9BR26 566 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 NMNAT1Q9HAN9 279 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-219ENST00000556432 C14orf119Q9NWQ9 140 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 PRPF19Q9UMS4 504 aaKnown RBP11.36□□□□□ -0.59
ACTN1-219ENST00000556432 A4GNTQ9UNA3 340 aa11.36□□□□□ -0.59
ACTN1-219ENST00000556432 CDC42EP2O14613 210 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 ANGPTL7O43827 346 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 PTBP3O95758 552 aaKnown RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 POU1F1P28069 291 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 SDHAP31040 664 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 GRK5P34947 590 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 TPTEP56180 551 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 GMFBP60983 142 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 HIST1H3AP68431 136 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 BLMHQ13867 455 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 HABP2Q14520 560 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 TRAM2Q15035 370 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 KCNMB1Q16558 191 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 RSPO1Q2MKA7 263 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 CYBRD1Q53TN4 286 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 ARSJQ5FYB0 599 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 HIST2H3PS2Q5TEC6 136 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 GPR139Q6DWJ6 353 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 HIST2H3AQ71DI3 136 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 RRM2BQ7LG56 351 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 ADCK1Q86TW2 530 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 OR2AJ1Q8NGZ0 328 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 OR8S1Q8NH09 359 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 OR2AE1Q8NHA4 323 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 TNFRSF14Q92956 283 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 TSSK2Q96PF2 358 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 DCTN5Q9BTE1 182 aa11.35□□□□□ -0.59
ACTN1-219ENST00000556432 METTL8Q9H825 291 aaKnown RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 VSX1Q9NZR4 365 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 SF3B6Q9Y3B4 125 aaKnown RBP11.35□□□□□ -0.59
ACTN1-219ENST00000556432 NKX6-3A6NJ46 265 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 BHLHE40O14503 412 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 ACOT8O14734 319 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 CHST1O43916 411 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 LHBP01229 141 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 PF4V1P10720 104 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 ZNF26P17031 533 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-219ENST00000556432 PAX6P26367 422 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 CRABP1P29762 137 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
ACTN1-219ENST00000556432 GZMMP51124 257 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 BMXP51813 675 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 ZNF92Q03936 586 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 RABL3Q5HYI8 236 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 TBPL2Q6SJ96 375 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 OFCC1Q8IZS5 231 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 FAM156AQ8NDB6 213 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 DMRTB1Q96MA1 342 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 C7orf26Q96N11 449 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 OR5M11Q96RB7 305 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 MRPL15Q9P015 296 aaKnown RBP11.34□□□□□ -0.59
ACTN1-219ENST00000556432 IER3IP1Q9Y5U9 82 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 CAPN7Q9Y6W3 813 aa11.34□□□□□ -0.59
ACTN1-219ENST00000556432 WI2-2373I1.2A0A1W2PRP0 233 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 H0YAE9 185 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 J3KTA2 159 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 M0R135 149 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 NDUFB2O95178 105 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 HLA-DQA2P01906 255 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 PF4P02776 101 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 SELLP14151 372 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 MSX2P35548 267 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-219ENST00000556432 GSK3BP49841 420 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
ACTN1-219ENST00000556432 CYLC2Q14093 348 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-219ENST00000556432 SNAI3Q3KNW1 292 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 KRTAP27-1Q3LI81 207 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 SLC18B1Q6NT16 456 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 PTCHD4Q6ZW05 846 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 MBOAT2Q6ZWT7 520 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 RNF113BQ8IZP6 322 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms