RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 LALBAP00709 142 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 RAF1P04049 648 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 ERCC1P07992 297 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF35P13682 527 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 GRNP28799 593 aaKnown RBP9.68□□□□□ -0.86
SHMT2-220ENST00000555634 LIPAP38571 399 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 DDOSTP39656 456 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 TMBIM6P55061 237 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 NANOS3P60323 173 aaKnown RBP9.68□□□□□ -0.86
SHMT2-220ENST00000555634 RPS25P62851 125 aaKnown RBP9.68□□□□□ -0.86
SHMT2-220ENST00000555634 RIPPLY1Q0D2K3 151 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 SNAI3Q3KNW1 292 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 GLYATL3Q5SZD4 288 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 ZBTB37Q5TC79 503 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 GPR107Q5VW38 600 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 NUP37Q8NFH4 326 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 LINC01560Q8TB33 94 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 RPS4Y2Q8TD47 263 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 PP6455Q8WZ26 134 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 TMEM106AQ96A25 262 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 PIK3IP1Q96FE7 263 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 PGLYRP3Q96LB9 341 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 KCTD7Q96MP8 289 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF75AQ96N20 296 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 CHCHD6Q9BRQ6 235 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 TCF7L1Q9HCS4 588 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 NPDC1Q9NQX5 325 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-220ENST00000555634 FAIMQ9NVQ4 179 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 CGGBP1Q9UFW8 167 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-220ENST00000555634 ENPP5Q9UJA9 477 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-220ENST00000555634 A0A1W2PPW3 197 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 PYCARD-AS1I3L0S3 204 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 GABRPO00591 440 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 PDCD5O14737 125 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 SLC22A1O15245 554 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 TIMM8AO60220 97 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-220ENST00000555634 THBDP07204 575 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 COX6B1P14854 86 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 RAC2P15153 192 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 NR4A1P22736 598 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 GADD45AP24522 165 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 WNT5AP41221 380 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 KLF3P57682 345 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-220ENST00000555634 MZT1Q08AG7 82 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 CNN3Q15417 329 aaKnown RBP9.67□□□□□ -0.86
SHMT2-220ENST00000555634 SSX1Q16384 188 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 HSD17B12Q53GQ0 312 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 NCMAPQ5T1S8 102 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 ADAM5Q6NVV9 412 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 COLCA1Q6ZS62 124 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 PRSS45Q7RTY3 260 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 CEACAM19Q7Z692 300 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 MYPOPQ86VE0 399 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-220ENST00000555634 SERPINA12Q8IW75 414 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF101Q8IZC7 436 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 PAQR4Q8N4S7 273 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-220ENST00000555634 OR5D14Q8NGL3 314 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 OR2AE1Q8NHA4 323 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 OR14A2Q96R54 314 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 NKIRAS2Q9NYR9 191 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 CRIM1Q9NZV1 1036 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 KCNN3Q9UGI6 736 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 FBXO9Q9UK97 447 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-220ENST00000555634 CMAHPQ9Y471 501 aa9.67□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF816-ZNF321PA0A0X1KG74 233 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 hCG_38984A0A1B0GV85 526 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 TRDV1A0A1B0GX56 115 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 ANXA2P2A6NMY6 339 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF701M0R085 212 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-220ENST00000555634 GABARAPO95166 117 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 CCL1P22362 96 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 CALRP27797 417 aaKnown RBP9.66□□□□□ -0.86
SHMT2-220ENST00000555634 CALCRP30988 508 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 THBS4P35443 961 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 GLRXP35754 106 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 TGFBR2P37173 567 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 SOX2P48431 317 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 HGFACQ04756 655 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 DOC2BQ14184 412 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 GK2Q14410 553 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-220ENST00000555634 CDSNQ15517 529 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 ACSM3Q53FZ2 586 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 SPATA46Q5T0L3 261 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 VHLLQ6RSH7 139 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 FBXW12Q6X9E4 464 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 USP43Q70EL4 1123 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 ANKRD13BQ86YJ7 626 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 DMRTC2Q8IXT2 367 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-220ENST00000555634 NKAIN3Q8N8D7 197 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 SYNPRQ8TBG9 265 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 SLC25A40Q8TBP6 338 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 SPSB4Q96A44 273 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 YIPF6Q96EC8 236 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 HIST1H2AAQ96QV6 131 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 PAPOLGQ9BWT3 736 aaKnown RBP9.66□□□□□ -0.86
SHMT2-220ENST00000555634 OR2J1Q9GZK6 312 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 SLC22A4Q9H015 551 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms