RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PLEKHA1Q9HB21 404 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 NPAP1Q9NZP6 1156 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 ZNF319Q9P2F9 582 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 CKLFQ9UBR5 152 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 KMT2BQ9UMN6 2715 aaPredicted RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 CACNA1CQ13936 2221 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 A0A1B0GTI1 187 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 H3BMQ9 156 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 CASKO14936 926 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 THBDP07204 575 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 ZNF20P17024 532 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 NR4A1P22736 598 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 CD40P25942 277 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 SOX2P48431 317 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 PPP1CBP62140 327 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 LSM3P62310 102 aaKnown RBP12.41□□□□□ -0.42
SHOX2-206ENST00000554685 ZBTB37Q5TC79 503 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 PGAP1Q75T13 922 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 PAQR4Q8N4S7 273 aaPredicted RBP12.41□□□□□ -0.42
SHOX2-206ENST00000554685 DACH2Q96NX9 599 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 CENPOQ9BU64 300 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 ESRP2Q9H6T0 727 aaKnown RBP12.41□□□□□ -0.42
SHOX2-206ENST00000554685 ZNF275Q9NSD4 429 aaPredicted RBP12.41□□□□□ -0.42
SHOX2-206ENST00000554685 V9GYS6 101 aa12.41□□□□□ -0.42
SHOX2-206ENST00000554685 TRBV5-7A0A0A0MS05 114 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 hCG_38984A0A1B0GV85 526 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 SELEP16581 610 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 FSTP19883 344 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
SHOX2-206ENST00000554685 DDOSTP39656 456 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 MTNR1BP49286 362 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 VBP1P61758 197 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 NCS1P62166 190 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 RIPPLY1Q0D2K3 151 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 CDSNQ15517 529 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 FOXB2Q5VYV0 432 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 ZNF101Q8IZC7 436 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 FTMTQ8N4E7 242 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 SEMA6DQ8NFY4 1073 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 OR51A4Q8NGJ6 313 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 OR1J1Q8NGS3 322 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 OR14K1Q8NGZ2 314 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 OR10AC1Q8NH08 325 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 OR2AE1Q8NHA4 323 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 TRMT61AQ96FX7 289 aaKnown RBP12.4□□□□□ -0.42
SHOX2-206ENST00000554685 RADILQ96JH8 1075 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 LYZL4Q96KX0 146 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 NEK6Q9HC98 313 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 TCF7L1Q9HCS4 588 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 NOX4Q9NPH5 578 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 PTTG3PQ9NZH4 202 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 STARD10Q9Y365 291 aa12.4□□□□□ -0.42
SHOX2-206ENST00000554685 TRAV1-2A0A0B4J238 106 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 PDCD5O14737 125 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 NGFP01138 241 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
SHOX2-206ENST00000554685 CALCRP30988 508 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 THBS4P35443 961 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 GNALP38405 381 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 SERPINB10P48595 397 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 PPP3R1P63098 170 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 FAM3AP98173 230 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 ZNF92Q03936 586 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 OR8B8Q15620 311 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 BEX5Q5H9J7 111 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 FBXW12Q6X9E4 464 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 SERPINA12Q8IW75 414 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 PARP16Q8N5Y8 322 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 CSNK2A3Q8NEV1 391 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 OR5D14Q8NGL3 314 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 PP6455Q8WZ26 134 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 REPIN1Q9BWE0 567 aaKnown RBP12.39□□□□□ -0.43
SHOX2-206ENST00000554685 SNTG1Q9NSN8 517 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 FOXJ3Q9UPW0 622 aa12.39□□□□□ -0.43
SHOX2-206ENST00000554685 ZFYVE26Q68DK2 2539 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 C5orf63A6NC05 138 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 GGT3PA6NGU5 568 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 VSTM5A8MXK1 200 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 IL1AP01583 271 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 RAC2P15153 192 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 GCH1P30793 250 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 GLRXP35754 106 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 GSK3AP49840 483 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 PSMD7P51665 324 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 SNTB2Q13425 540 aaKnown RBP12.38□□□□□ -0.43
SHOX2-206ENST00000554685 GK2Q14410 553 aaPredicted RBP12.38□□□□□ -0.43
SHOX2-206ENST00000554685 INSL4Q14641 139 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 ZNF718Q3SXZ3 478 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 NCMAPQ5T1S8 102 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 RGS7BPQ6MZT1 257 aaPredicted RBP12.38□□□□□ -0.43
SHOX2-206ENST00000554685 NUP37Q8NFH4 326 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 LINC01560Q8TB33 94 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 FGGYQ96C11 551 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 DCSTAMPQ9H295 470 aa12.38□□□□□ -0.43
SHOX2-206ENST00000554685 OR51B6Q9H340 312 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms