RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CLRN1P58418 232 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 FMODQ06828 376 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 GALEQ14376 348 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 MED22Q15528 200 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 CNPY1Q3B7I2 92 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 NRN1LQ496H8 165 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 ARMCX4Q5H9R4 360 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 PABPC1L2AQ5JQF8 200 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 C10orf128Q5T292 105 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 LINC01590Q5TEZ4 76 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 GPR107Q5VW38 600 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 TMPRSS11AQ6ZMR5 421 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 GDPGP1Q6ZNW5 385 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 SLC16A14Q7RTX9 510 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF101Q8IZC7 436 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 SYS1Q8N2H4 156 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 LRRC18Q8N456 261 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF485Q8NCK3 441 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 OR9Q1Q8NGQ5 310 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 OR2T27Q8NH04 317 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 HAVCR2Q8TDQ0 301 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF649Q9BS31 505 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 FUNDC2Q9BWH2 189 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 TMPRSS13Q9BYE2 586 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 OCEL1Q9H607 264 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF665Q9H7R5 613 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 RNF121Q9H920 327 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 NKIRAS2Q9NYR9 191 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 LOC100509620A0A075B734 347 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 A0A0A6YYJ9 748 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 TRAV20A0A0B4J274 112 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 IGHV1-69-2A0A0G2JMI3 117 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 SLC22A23A1A5C7 686 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 SLC22A1O15245 554 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 PNPP00491 289 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 IGHV3-13P01766 116 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 IGHV2-5P01817 119 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 CD36P16671 472 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 EPHA1P21709 976 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 TGFBR2P37173 567 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 RBMXP38159 391 aaKnown RBP8.97□□□□□ -0.97
SHMT2-215ENST00000554656 MPV17P39210 176 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 CRYBB2P43320 205 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 TAS2R43P59537 309 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 ACTA2P62736 377 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 ACTG2P63267 376 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 MRPS34P82930 218 aaKnown RBP8.97□□□□□ -0.97
SHMT2-215ENST00000554656 MRPL28Q13084 256 aaKnown RBP8.97□□□□□ -0.97
SHMT2-215ENST00000554656 GPR50Q13585 617 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 TPBGQ13641 420 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 TBC1D28Q2M2D7 210 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 SLC36A2Q495M3 483 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 SPRNQ5BIV9 151 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 SPATA46Q5T0L3 261 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 RFPL4BQ6ZWI9 263 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 SLC16A9Q7RTY1 509 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 DPPA2Q7Z7J5 298 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 OR1J1Q8NGS3 322 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 AKR7LQ8NHP1 331 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 C12orf43Q96C57 262 aaKnown RBP8.97□□□□□ -0.97
SHMT2-215ENST00000554656 ZMYND19Q96E35 227 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-215ENST00000554656 POM121L2Q96KW2 1035 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 OPALINQ96PE5 141 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 OR5M11Q96RB7 305 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 YIPF3Q9GZM5 350 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 SYT4Q9H2B2 425 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 C1orf198Q9H425 327 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 RPRD1BQ9NQG5 326 aaKnown RBP8.97□□□□□ -0.97
SHMT2-215ENST00000554656 CLEC2DQ9UHP7 191 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 B9D1Q9UPM9 204 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 GRIP1Q9Y3R0 1128 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 WIPI2Q9Y4P8 454 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 TMEM14AQ9Y6G1 99 aa8.97□□□□□ -0.97
SHMT2-215ENST00000554656 IGLV1-36A0A0B4J1U3 117 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 IQCMA0A1B0GVH7 501 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 DAPL1A0PJW8 107 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 ZSCAN5BA6NJL1 495 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 H3BMQ9 156 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 PHYHO14832 338 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 PLPP2O43688 288 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 MPZL1O95297 269 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 IGHV1-46P01743 117 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 GYPBP06028 91 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 CLUP10909 449 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 CPEP16870 476 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF32P17041 273 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 LIPAP38571 399 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 RGS6P49758 472 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 MMP15P51511 669 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF84P51523 738 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 TSTQ16762 297 aaKnown RBP8.96□□□□□ -0.98
SHMT2-215ENST00000554656 PCGF3Q3KNV8 242 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 THEM4Q5T1C6 240 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 FAHD2BQ6P2I3 314 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-215ENST00000554656 SLC25A47Q6Q0C1 308 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 C12orf54Q6X4T0 127 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 SLC16A12Q6ZSM3 486 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 KCTD20Q7Z5Y7 419 aa8.96□□□□□ -0.98
SHMT2-215ENST00000554656 ERI1Q8IV48 349 aaKnown RBP8.96□□□□□ -0.98
SHMT2-215ENST00000554656 SLC35F2Q8IXU6 374 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms