RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 NTF4P34130 210 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 PRSS3P35030 304 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 CASRP41180 1078 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ALDH3B1P43353 468 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 GZMKP49863 264 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ZNF84P51523 738 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 EFNB2P52799 333 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ZNF121P58317 390 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ECH1Q13011 328 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 PLA2G7Q13093 441 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 MAB21L1Q13394 359 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 TNK1Q13470 666 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 TAF13Q15543 124 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 FAM189A2Q15884 450 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 SGCAQ16586 387 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ZFP69Q49AA0 526 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 CCDC92Q53HC0 331 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 HES3Q5TGS1 186 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ABHD17BQ5VST6 288 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 CARD17Q5XLA6 110 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 SLC25A25Q6KCM7 469 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 DHRS13Q6UX07 377 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 UTS2BQ765I0 119 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 OR2W3Q7Z3T1 314 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 FGD2Q7Z6J4 655 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ADGRE4PQ86SQ3 457 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 YRDCQ86U90 279 aaKnown RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 MED12LQ86YW9 2145 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 IZUMO1Q8IYV9 350 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 GPR137CQ8N3F9 429 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 SLC22A24Q8N4F4 322 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 PAQR4Q8N4S7 273 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 OR2M7Q8NG81 312 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 OR8B12Q8NGG6 310 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 OR51A2Q8NGJ7 313 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 OR14K1Q8NGZ2 314 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 OR10D3Q8NH80 312 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 OR14L1PQ8NHC6 308 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 NKD1Q969G9 470 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 RELTQ969Z4 430 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 FGGYQ96C11 551 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ADAT3Q96EY9 351 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 LINC00470Q9BZP3 86 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ALX4Q9H161 411 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 METTL17Q9H7H0 456 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 AUNIPQ9H7T9 357 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 RANGRFQ9HD47 186 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ACKR4Q9NPB9 350 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 NUDT15Q9NV35 164 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 PAQR5Q9NXK6 330 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ING3Q9NXR8 418 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 PTTG3PQ9NZH4 202 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 CRIM1Q9NZV1 1036 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ZNF319Q9P2F9 582 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 ASH2LQ9UBL3 628 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 GHRLQ9UBU3 117 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 GTF2A1LQ9UNN4 478 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 V9GYS6 101 aa5.28□□□□□ -1.56
VIPAS39-204ENST00000553576 TNRC6AQ8NDV7 1962 aaKnown RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 WDR87Q6ZQQ6 2873 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 FRYLO94915 3013 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 TRAV18A0A075B6X5 111 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 A0A1B0GUH1 482 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 PINLYPA6NC86 204 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM172BPA6NC97 362 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR6C65A6NJZ3 312 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF724A8MTY0 619 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SNRPGP15A8MWD9 76 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM14DPA8MWL7 114 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 G3V3Y1 287 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 RPL36A-HNRNPH2H7BZ11 118 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 RAB27BO00194 218 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 EIF1AYO14602 144 aaKnown RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 EREGO14944 169 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SYNGR3O43761 229 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 LMX1BO60663 402 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 PEX14O75381 377 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SNAPC5O75971 98 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 NDUFB6O95139 128 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 WDPCPO95876 746 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 MT-ND4P03905 459 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 CHRM2P08172 466 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 UBBP0CG47 229 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SULT1A3P0DMM9 295 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SULT1A4P0DMN0 295 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 EDN3P14138 238 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 CPN1P15169 458 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 RAB3AP20336 220 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 CRYGSP22914 178 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 TCEA1P23193 301 aaKnown RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 MPZP25189 248 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 GDF1P27539 372 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 THBS4P35443 961 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 FAUP35544 74 aaKnown RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 CX3CR1P49238 355 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SELENOPP49908 381 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 LHX2P50458 406 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 CCR6P51684 374 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 PRKXP51817 358 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 GALK2Q01415 458 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms