RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	IL36RN	Q9UBH0	155 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	MOK	Q9UQ07	419 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	APC	P25054	2843 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	CR1	P17927	2039 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	LOC102725191	A0A1B0GVB3	256 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	IQCM	A0A1B0GVH7	501 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	HTR3E	A5X5Y0	456 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570		A6NIZ1	184 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	ZNF99	A8MXY4	864 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	INAFM1	C9JVW0	142 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CTDSP2	O14595	271 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CDC42EP2	O14613	210 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	HS3ST1	O14792	307 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SPRY3	O43610	288 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	TRAF3IP2	O43734	574 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC16A7	O60669	478 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	KRT36	O76013	467 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	ZNF432	O94892	652 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	NDUFB2	O95178	105 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC2A10	O95528	541 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PPP1R3D	O95685	299 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	RAB36	O95755	333 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	TOMM40	O96008	361 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	REN	P00797	406 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR8G3P	P0DMU2	310 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PRKACG	P22612	351 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PTAFR	P25105	342 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CCKAR	P32238	428 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	ARHGDIA	P52565	204 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	MFAP4	P55083	255 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CDH11	P55287	796 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SH3BGR	P55822	239 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	RAP1B	P61224	184 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	RAP1A	P62834	184 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	GALK2	Q01415	458 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	HSF2	Q03933	536 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	RUNX1T1	Q06455	604 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	FMOD	Q06828	376 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SPOCK1	Q08629	439 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	BNIP1	Q12981	228 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CARTPT	Q16568	116 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	GSG1	Q2KHT4	349 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PCGF3	Q3KNV8	242 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CLEC12A	Q5QGZ9	265 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	C1orf146	Q5VVC0	180 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	OTP	Q5XKR4	325 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	GGNBP1	Q5YKI7	109 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SIGIRR	Q6IA17	410 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR2T5	Q6IEZ7	315 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	TMPRSS11F	Q6ZWK6	438 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC16A14	Q7RTX9	510 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	HDDC2	Q7Z4H3	204 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	TSEN54	Q7Z6J9	526 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	MDP1	Q86V88	176 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	LINC00346	Q8IVM7	164 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	WDFY1	Q8IWB7	410 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	FOXRED2	Q8IWF2	684 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SKA3	Q8IX90	412 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	TMEM123	Q8N131	208 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC22A24	Q8N4F4	322 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CLDN22	Q8N7P3	220 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	POC5	Q8NA72	575 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR2T29	Q8NH02	315 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR4K13	Q8NH42	304 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	GIPC3	Q8TF64	312 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SMAP2	Q8WU79	429 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CANT1	Q8WVQ1	401 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	TMEM54	Q969K7	222 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PIGT	Q969N2	578 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	RASD2	Q96D21	266 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	ASB9	Q96DX5	294 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	LRR1	Q96L50	414 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570		Q96M85	177 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	HARBI1	Q96MB7	349 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC38A2	Q96QD8	506 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PCGF1	Q9BSM1	259 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	CHID1	Q9BWS9	393 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	KRTAP1-5	Q9BYS1	174 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR10A4	Q9H209	315 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	LRMDA	Q9H2I8	198 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	YY1AP1	Q9H869	796 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PLEKHF2	Q9H8W4	249 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	ZNF556	Q9HAH1	456 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	MAN2C1	Q9NTJ4	1040 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	NPAP1	Q9NZP6	1156 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	PDP1	Q9P0J1	537 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	STX18	Q9P2W9	335 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	MALT1	Q9UDY8	824 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	MGAT4B	Q9UQ53	548 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	N6AMT1	Q9Y5N5	214 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC25A15	Q9Y619	301 aa		4.03	□□□□□ -1.76
ATXN3-222	ENST00000553570	POLQ	O75417	2590 aa		4.03	□□□□□ -1.77
ATXN3-222	ENST00000553570	MYO9A	B2RTY4	2548 aa		4.02	□□□□□ -1.77
ATXN3-222	ENST00000553570	TACC2	O95359	2948 aa		4.02	□□□□□ -1.77
ATXN3-222	ENST00000553570	IGHV1-18	A0A0C4DH31	117 aa		4.02	□□□□□ -1.77
ATXN3-222	ENST00000553570	IGHV4-28	A0A0C4DH34	117 aa		4.02	□□□□□ -1.77

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