RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ORC6Q9Y5N6 252 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 SONP18583 2426 aaKnown RBP12.94□□□□□ -0.34
SHMT2-204ENST00000553324 YLPM1P49750 1951 aaKnown RBP12.94□□□□□ -0.34
SHMT2-204ENST00000553324 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-204ENST00000553324 ACOD1A6NK06 481 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 ANKRD30BLA7E2S9 258 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 FAM157AC9JC47 383 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 F5H5P2 479 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 H0YL77 283 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 TMEM178BH3BS89 294 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 ZNF254O75437 659 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 FSTL3O95633 263 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 IGHV2-5P01817 119 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 SRD5A1P18405 259 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 THBS2P35442 1172 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 CD200P41217 278 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 NAA10P41227 235 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-204ENST00000553324 ZNF121P58317 390 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-204ENST00000553324 BTG1P62324 171 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 FAM57BQ71RH2 274 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 KRT77Q7Z794 578 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 GID4Q8IVV7 300 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 MUC20Q8N307 709 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-204ENST00000553324 OR2AE1Q8NHA4 323 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 SGK3Q96BR1 496 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 REEP6Q96HR9 211 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 PGAM5Q96HS1 289 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 GABARAPL3Q9BY60 117 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 HIF1ANQ9NWT6 349 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 HAO2Q9NYQ3 351 aa12.94□□□□□ -0.34
SHMT2-204ENST00000553324 PHYHO14832 338 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 IGHV2-70P01814 119 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 CA6P23280 308 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 GATA3P23771 443 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 EPHA2P29317 976 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 DCTDP32321 178 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 MDH2P40926 338 aaKnown RBP12.93□□□□□ -0.34
SHMT2-204ENST00000553324 MMP16P51512 607 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 MAB21L1Q13394 359 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 AADACL4Q5VUY2 407 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 PRSS45Q7RTY3 260 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 CSNK2A3Q8NEV1 391 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 OR8J1Q8NGP2 316 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 OR11L1Q8NGX0 322 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 TRUB1Q8WWH5 349 aaKnown RBP12.93□□□□□ -0.34
SHMT2-204ENST00000553324 AMELYQ99218 206 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 CNN2Q99439 309 aaKnown RBP12.93□□□□□ -0.34
SHMT2-204ENST00000553324 PKP2Q99959 881 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 C14orf119Q9NWQ9 140 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 UBAP1Q9NZ09 502 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 DNAJC27Q9NZQ0 273 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 JMJD1CQ15652 2540 aa12.93□□□□□ -0.34
SHMT2-204ENST00000553324 CCDC182A6NF36 153 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 SAC3D1A6NKF1 404 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 FOXH1O75593 365 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 CDC42P60953 191 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 FAM3AP98173 230 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 ROM1Q03395 351 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 ZNF679Q8IYX0 411 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 OR56B2PQ8NGI1 322 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 Q8TCH9 128 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 SIGLEC11Q96RL6 698 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 IL4I1Q96RQ9 567 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 ADAT1Q9BUB4 502 aaKnown RBP12.92□□□□□ -0.34
SHMT2-204ENST00000553324 RIBC2Q9H4K1 309 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 FN3KRPQ9HA64 309 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 LPAR2Q9HBW0 351 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 BRD7Q9NPI1 651 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 USE1Q9NZ43 259 aa12.92□□□□□ -0.34
SHMT2-204ENST00000553324 WARS2Q9UGM6 360 aaKnown RBP12.92□□□□□ -0.34
SHMT2-204ENST00000553324 A0A0G2JMP0 313 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 A0A0X1KG70 313 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 H3BNX3 289 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 PLPP2O43688 288 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 PTBP3O95758 552 aaKnown RBP12.91□□□□□ -0.34
SHMT2-204ENST00000553324 ALPLP05186 524 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 SRP14P37108 136 aaKnown RBP12.91□□□□□ -0.34
SHMT2-204ENST00000553324 GSK3AP49840 483 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 ALDH3A2P51648 485 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 HCCSP53701 268 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 PRSS12P56730 875 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 PSMA6P60900 246 aaKnown RBP12.91□□□□□ -0.34
SHMT2-204ENST00000553324 POU4F2Q12837 409 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 SCGB2A2Q13296 93 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 TMED1Q13445 227 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 FAHD2BQ6P2I3 314 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-204ENST00000553324 LRRN1Q6UXK5 716 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 OR4M2Q8NGB6 313 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 ZNF420Q8TAQ5 688 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-204ENST00000553324 RFKQ969G6 155 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 FAHD2AQ96GK7 314 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 PATZ1Q9HBE1 687 aaKnown RBP12.91□□□□□ -0.34
SHMT2-204ENST00000553324 ABCB9Q9NP78 766 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 LRP12Q9Y561 859 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 ABCA2Q9BZC7 2435 aa12.91□□□□□ -0.34
SHMT2-204ENST00000553324 PPIAL4EA0A075B759 164 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 PPIAL4CA0A0B4J2A2 164 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms