RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RBP1P09455 135 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ANXA4P09525 319 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CSF3P09919 207 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 NPIPA8P0DM63 369 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PPIAL4FP0DN26 164 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PRPS2P11908 318 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 BCKDHAP12694 445 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ANPEPP15144 967 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 AREGP15514 252 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CBR1P16152 277 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 GNB3P16520 340 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TCP1P17987 556 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 GGT1P19440 569 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PTMSP20962 102 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MAPK3P27361 379 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 IL12AP29459 219 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MPIP34949 423 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 EIF1P41567 113 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 EVX1P49640 407 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CLK1P49759 484 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF83P51522 516 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 IDH3GP51553 393 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 P2RX1P51575 399 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 NCBP2P52298 156 aaKnown RBP eCLIP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 RAP1GDS1P52306 607 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF133P52736 654 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CRYBA2P53672 197 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PKNOX1P55347 436 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PAX9P55771 341 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 XGP55808 180 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 DNAJB13P59910 316 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 UBA52P62987 128 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CSNK2BP67870 215 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 HBA1P69905 142 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 DEFA6Q01524 100 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PAX8Q06710 450 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF763Q0D2J5 394 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PPP1R8Q12972 351 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 IFT88Q13099 833 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 STX5Q13190 355 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SELENBP1Q13228 472 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 QPRTQ15274 297 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 RAB35Q15286 201 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SPHARQ15513 63 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ZNHIT3Q15649 155 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 HIST3H3Q16695 136 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 FAM83EQ2M2I3 478 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MS4A18Q3C1V0 323 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF876PQ49A33 203 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 HIKESHIQ53FT3 197 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SPIN4Q56A73 249 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TNFAIP8L3Q5GJ75 292 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ASPHD2Q6ICH7 369 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 FAM53AQ6NSI3 398 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF774Q6NX45 483 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 BHLHB9Q6PI77 547 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 FIP1L1Q6UN15 594 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 C6orf89Q6UWU4 347 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 C17orf107Q6ZR85 190 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 BTN2A1Q7KYR7 527 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SSX8Q7RTT4 187 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PAGE2Q7Z2X7 111 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 C5orf24Q7Z6I8 188 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MISPQ8IVT2 679 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 FAM9CQ8IZT9 166 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 BATF2Q8N1L9 274 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 C10orf111Q8N326 155 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 GATSQ8NAP1 163 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 OR4K17Q8NGC6 315 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 OR1K1Q8NGR3 316 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 RNASE8Q8TDE3 154 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PYROXD1Q8WU10 500 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 GATAD1Q8WUU5 269 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SELENOMQ8WWX9 145 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CDS1Q92903 461 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TEX37Q96LM6 180 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TSSK3Q96PN8 268 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CCT7Q99832 543 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PKP2Q99959 881 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 C1QTNF6Q9BXI9 259 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CLEC7AQ9BXN2 247 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 EBPLQ9BY08 206 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MRPL37Q9BZE1 423 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 LINC00470Q9BZP3 86 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 OR11A1Q9GZK7 315 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SLITRK2Q9H156 845 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 WDR13Q9H1Z4 485 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 C1orf21Q9H246 121 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SLC38A1Q9H2H9 487 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 WDR41Q9HAD4 459 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 C3orf14Q9HBI5 128 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 GPN1Q9HCN4 374 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 EXOSC3Q9NQT5 275 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MMP26Q9NRE1 261 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CTPS2Q9NRF8 586 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CA10Q9NS85 328 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ATAD3AQ9NVI7 634 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 DCAF16Q9NXF7 216 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PLEK2Q9NYT0 353 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TAS2R16Q9NYV7 291 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms