RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ZNF92Q03936 586 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 CTF1Q16619 201 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 ZMAT1Q5H9K5 638 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 CEACAM19Q7Z692 300 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 PLPP7Q8NBV4 271 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 CCDC54Q8NEL0 328 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 FAM71F1Q96KD3 344 aaPredicted RBP24.82■■□□□ 1.56
BRF1-213ENST00000548421 BCL2L14Q9BZR8 327 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 FAM192AQ9GZU8 254 aa24.82■■□□□ 1.56
BRF1-213ENST00000548421 TXNL4BQ9NX01 149 aaKnown RBP24.82■■□□□ 1.56
BRF1-213ENST00000548421 DPRXA6NFQ7 191 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 ZNF12P17014 697 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 MAPK3P27361 379 aaPredicted RBP24.81■■□□□ 1.56
BRF1-213ENST00000548421 PPP1CBP62140 327 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 BSPH1Q075Z2 132 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 PAMR1Q6UXH9 720 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 UNQ9370/PRO34162Q6UXP9 181 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 C1orf174Q8IYL3 243 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 OR13C3Q8NGS6 347 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 SOX7Q9BT81 388 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 CENPOQ9BU64 300 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 OPA3Q9H6K4 179 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 ESRP2Q9H6T0 727 aaKnown RBP24.81■■□□□ 1.56
BRF1-213ENST00000548421 PTTG3PQ9NZH4 202 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 RSL24D1Q9UHA3 163 aaKnown RBP24.81■■□□□ 1.56
BRF1-213ENST00000548421 SPEF1Q9Y4P9 236 aa24.81■■□□□ 1.56
BRF1-213ENST00000548421 CADP27708 2225 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 MTRF1O75570 445 aaKnown RBP24.8■■□□□ 1.56
BRF1-213ENST00000548421 MAGEB1P43366 347 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 SOX2P48431 317 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 LSM3P62310 102 aaKnown RBP24.8■■□□□ 1.56
BRF1-213ENST00000548421 FOXB2Q5VYV0 432 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 C22orf42Q6IC83 251 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 PHYHIPQ92561 330 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 DERL3Q96Q80 235 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 POFUT1Q9H488 388 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 GSTK1Q9Y2Q3 226 aa24.8■■□□□ 1.56
BRF1-213ENST00000548421 LOC390937A0A1W2PQ73 354 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 ZNF701M0R085 212 aaPredicted RBP24.79■■□□□ 1.56
BRF1-213ENST00000548421 DHRS3O75911 302 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 CD2P06729 351 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 RNF224P0DH78 156 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 SPOCK1Q08629 439 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 GK2Q14410 553 aaPredicted RBP24.79■■□□□ 1.56
BRF1-213ENST00000548421 Q6ZSR3 168 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 MRPL21Q7Z2W9 205 aaKnown RBP24.79■■□□□ 1.56
BRF1-213ENST00000548421 OR1J1Q8NGS3 322 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 TMEM106AQ96A25 262 aa24.79■■□□□ 1.56
BRF1-213ENST00000548421 hCG_38984A0A1B0GV85 526 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 ATP6V1G2-DDX39BF2Z307 99 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 ABCD4O14678 606 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 TUBG1P23258 451 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 SRSF1Q07955 248 aaKnown RBP eCLIP24.78■■□□□ 1.56
BRF1-213ENST00000548421 PGAP1Q75T13 922 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 OR14K1Q8NGZ2 314 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 DGCR14Q96DF8 476 aaKnown RBP24.78■■□□□ 1.56
BRF1-213ENST00000548421 REPIN1Q9BWE0 567 aaKnown RBP24.78■■□□□ 1.56
BRF1-213ENST00000548421 TUBG2Q9NRH3 451 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 ZNF275Q9NSD4 429 aaPredicted RBP24.78■■□□□ 1.56
BRF1-213ENST00000548421 V9GYS6 101 aa24.78■■□□□ 1.56
BRF1-213ENST00000548421 H3BMQ9 156 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 J3QKU1 62 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 CASKO14936 926 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 KIR2DL3P43628 341 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 VBP1P61758 197 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 FAM3AP98173 230 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 SPATA46Q5T0L3 261 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 NCMAPQ5T1S8 102 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 PIAS4Q8N2W9 510 aaPredicted RBP24.77■■□□□ 1.56
BRF1-213ENST00000548421 SSC4DQ8WTU2 575 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 PLEKHA1Q9HB21 404 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 A0A1W2PPK0 400 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 DHRS7CA6NNS2 312 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 C19orf84I3L1E1 186 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 ARL6IP5O75915 188 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 RAF1P04049 648 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 UCHL1P09936 223 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 ERVS71-1P61550 626 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 NCS1P62166 190 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 SNTB2Q13425 540 aaKnown RBP24.77■■□□□ 1.56
BRF1-213ENST00000548421 HLXQ14774 488 aaPredicted RBP24.77■■□□□ 1.56
BRF1-213ENST00000548421 BEX5Q5H9J7 111 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 FAM27D1Q5T7N8 215 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 SLC25A40Q8TBP6 338 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 C12orf43Q96C57 262 aaKnown RBP24.77■■□□□ 1.56
BRF1-213ENST00000548421 PLPPR2Q96GM1 343 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 RADILQ96JH8 1075 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 KCTD7Q96MP8 289 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 OR2J1Q9GZK6 312 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 RNF167Q9H6Y7 350 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 NOX4Q9NPH5 578 aa24.77■■□□□ 1.56
BRF1-213ENST00000548421 KLF2Q9Y5W3 355 aaPredicted RBP24.77■■□□□ 1.56
BRF1-213ENST00000548421 TRBV5-7A0A0A0MS05 114 aa24.76■■□□□ 1.55
BRF1-213ENST00000548421 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP24.76■■□□□ 1.55
BRF1-213ENST00000548421 LMX1BO60663 402 aa24.76■■□□□ 1.55
BRF1-213ENST00000548421 IGFBP2P18065 325 aa24.76■■□□□ 1.55
BRF1-213ENST00000548421 CALRP27797 417 aaKnown RBP24.76■■□□□ 1.55
BRF1-213ENST00000548421 GSK3AP49840 483 aa24.76■■□□□ 1.55
BRF1-213ENST00000548421 OR8B8Q15620 311 aa24.76■■□□□ 1.55
BRF1-213ENST00000548421 HSD17B12Q53GQ0 312 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms