RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TCTEX1D2Q8WW35 142 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 ISOC2Q96AB3 205 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 RAB3CQ96E17 227 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 MMABQ96EY8 250 aaPredicted RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 TMEM41AQ96HV5 264 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 LPAR5Q9H1C0 372 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 ANAPC10Q9UM13 185 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 A0A1W2PPH5 198 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 M0R036 132 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 PLPP3O14495 311 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 YKT6O15498 198 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 SFTPBP07988 381 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 PGCP20142 388 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 IL12BP29460 328 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 ZNF93P35789 620 aaPredicted RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 KIR2DL1P43626 348 aaPredicted RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 RABIFP47224 123 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 CSNK1EP49674 416 aaKnown RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 SLC37A1P57057 533 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 SLC26A5P58743 744 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 Q7L0L9 218 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 PEG10Q86TG7 708 aaKnown RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 RTBDNQ9BSG5 229 aaPredicted RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 PNO1Q9NRX1 252 aaKnown RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 C5orf42Q9H799 3197 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 TMED7-TICAM2A0A0A6YYA0 188 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 A0A0A6YYD4 124 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 C7orf77A4D0Y5 90 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 FRG2CA6NGY1 282 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 FKTNO75072 461 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 WISP1O95388 367 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 MPIG6BO95866 241 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 IGHV2-5P01817 119 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 HIST1H1DP16402 221 aaKnown RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
SRP54-202ENST00000546080 ACKR3P25106 362 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 PMELP40967 661 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 FMODQ06828 376 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 TMEM196Q5HYL7 178 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 C1orf140Q5VVS0 124 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 KLHL24Q6TFL4 600 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 SLC46A1Q96NT5 459 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 TAAR9Q96RI9 348 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 GAL3ST4Q96RP7 486 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 OCSTAMPQ9BR26 566 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 PLA2G2FQ9BZM2 168 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 BCL2L14Q9BZR8 327 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 TUBA4BQ9H853 241 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 FBLN5Q9UBX5 448 aa12.62□□□□□ -0.39
SRP54-202ENST00000546080 TRBV23-1A0A0A0MS06 115 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 K7EPK0 472 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 SOCS1O15524 211 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 ZNF217O75362 1048 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 CLN5O75503 358 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 JTBO76095 146 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 HTR3BO95264 441 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 TSPAN15O95858 294 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 IGHV2-70P01814 119 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 TTRP02766 147 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 NQO2P16083 231 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 AMY2BP19961 511 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 RAB5AP20339 215 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 RPL12P30050 165 aaKnown RBP12.61□□□□□ -0.39
SRP54-202ENST00000546080 NTSR1P30989 418 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 EIF2S3P41091 472 aaKnown RBP12.61□□□□□ -0.39
SRP54-202ENST00000546080 MMP16P51512 607 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 POLR2HP52434 150 aaKnown RBP12.61□□□□□ -0.39
SRP54-202ENST00000546080 PLAC9Q5JTB6 97 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 OR2A2Q6IF42 318 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 GLIPR1L1Q6UWM5 242 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 FAM71E2Q8N5Q1 922 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 KDF1Q8NAX2 398 aaPredicted RBP12.61□□□□□ -0.39
SRP54-202ENST00000546080 FOXQ1Q9C009 403 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 OR8D2Q9GZM6 311 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 FAM206AQ9NX38 181 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 PLA2G2EQ9NZK7 142 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
SRP54-202ENST00000546080 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 A0A1W2PR64 198 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 A8MVM7 634 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 GATCO43716 136 aaKnown RBP12.6□□□□□ -0.39
SRP54-202ENST00000546080 AHSA1O95433 338 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 ZNF20P17024 532 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 GALNSP34059 522 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 OR3A2P47893 321 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 P2RY4P51582 365 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 IL15RAQ13261 267 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 ACER2Q5QJU3 275 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 TMPRSS9Q7Z410 1059 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 ZNF248Q8NDW4 579 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms