RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 BATF2Q8N1L9 274 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM105Q8N8V8 129 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 OR6T1Q8NGN1 323 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CMTM3Q96MX0 182 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF281Q9Y2X9 895 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 ALPK2Q86TB3 2170 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 A0A1W2PPV9 198 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 HS3ST1O14792 307 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SH2D1BO14796 132 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 TCAPO15273 167 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SPP1P10451 314 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 TAS2R20P59543 309 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RBMS2Q15434 407 aaKnown RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RSPO4Q2I0M5 234 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RPL22L1Q6P5R6 122 aaKnown RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 B3GLCTQ6Y288 498 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF793Q6ZN11 406 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SMIM15Q7Z3B0 74 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CBLN2Q8IUK8 224 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 STPG2Q8N412 459 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CLDN22Q8N7P3 220 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 OR4F15Q8NGB8 312 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CLDN23Q96B33 292 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 KIRREL1Q96J84 757 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 MED29Q9NX70 200 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CHD7Q9P2D1 2997 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 MEIS3P1A6NDR6 274 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RAB27BO00194 218 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 OR2T7P0C7T2 308 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 UBCP0CG48 685 aaKnown RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RPA2P15927 270 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 AGTR1P30556 359 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF93P35789 620 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 VEGFCP49767 419 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RAB1AP62820 205 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RHBDD2Q6NTF9 364 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 VN1R4Q7Z5H5 301 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SYT9Q86SS6 491 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF573Q86YE8 665 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SLC25A45Q8N413 288 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 OR7G2Q8NG99 324 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 OR2T27Q8NH04 317 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM163Q8TC26 289 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RDH5Q92781 318 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CORO2AQ92828 525 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RAB3CQ96E17 227 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RHOVQ96L33 236 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 PTDSS2Q9BVG9 487 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 MED20Q9H944 212 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 ASF1BQ9NVP2 202 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 ALPK3Q96L96 1907 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CADP27708 2225 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 DIDO1Q9BTC0 2240 aaKnown RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 FRG2CA6NGY1 282 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TNFSF12O43508 249 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 RBP2P50120 134 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TAS2R31P59538 309 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 NKX6-1P78426 367 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 FOXF1Q12946 379 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ACKR1Q16570 336 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 FAM74A1Q5RGS3 127 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 CD163Q86VB7 1156 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF321PQ8N8H1 164 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 FGGYQ96C11 551 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 RASD2Q96D21 266 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 IKZF5Q9H5V7 419 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 NOX4Q9NPH5 578 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 RPH3ALQ9UNE2 315 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 THADAQ6YHU6 1953 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 LIPCP11150 499 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 PEBP1P30086 187 aaKnown RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 GABRA4P48169 554 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SUB1P53999 127 aaKnown RBP eCLIP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 KIAA0040Q15053 153 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SPATA46Q5T0L3 261 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 B3GNTL1Q67FW5 361 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ATRAIDQ6UW56 229 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM179BQ7Z7N9 219 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 HPSE2Q8WWQ2 592 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ABHD6Q9BV23 337 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SERTAD4Q9NUC0 356 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ONECUT1Q9UBC0 465 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 OR52A1Q9UKL2 312 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 KIAA1671Q9BY89 1806 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 C2orf16Q68DN1 1984 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 NCBP2LA6PVI3 153 aaKnown RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TSTD3H0UI37 97 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 J3KTA2 159 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 GPX5O75715 221 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 DAPP51397 102 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SUMO3P55854 103 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 RPS16P62249 146 aaKnown RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 THEM4Q5T1C6 240 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 HACD4Q5VWC8 232 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 PLAG1Q6DJT9 500 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 FCRL6Q6DN72 434 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 LAMTOR1Q6IAA8 161 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 Q6ZTK2 550 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 GDF7Q7Z4P5 450 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms