RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 RAB3CQ96E17 227 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 USB1Q9BQ65 265 aaKnown RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 OR11A1Q9GZK7 315 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 ZNF768Q9H5H4 540 aaKnown RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 PTGES2Q9H7Z7 377 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 RHOFQ9HBH0 211 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 FANCFQ9NPI8 374 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.77□□□□□ -1.17
TDP1-204ENST00000545686 CUTCQ9NTM9 273 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 KLHL13Q9P2N7 655 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 SRPK3Q9UPE1 567 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 MEMO1Q9Y316 297 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 C17orf51A8MQB3 221 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 PRSS44E7EML9 344 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 SPP1P10451 314 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 ZNF20P17024 532 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 SUMO3P55854 103 aaPredicted RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 HSF1Q00613 529 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 PDZK1IP1Q13113 114 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 TMPPEQ6ZT21 453 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 ANGPTL5Q86XS5 388 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 ZNF101Q8IZC7 436 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 POC1AQ8NBT0 407 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 OR56B1Q8NGI3 324 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 OR1N1Q8NGS0 311 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 OR13C9Q8NGT0 318 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 OR5H2Q8NGV7 314 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 RXFP4Q8TDU9 374 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 ZC3H10Q96K80 434 aaKnown RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 SLC26A1Q9H2B4 701 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 IGFLR1Q9H665 355 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 SEC61A2Q9H9S3 476 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 CHST11Q9NPF2 352 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 CENPMQ9NSP4 180 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 MRPS28Q9Y2Q9 187 aaKnown RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 A0A0A6YYD4 124 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 CDC14CA4D256 554 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 ANKUB1A6NFN9 424 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 MSGN1A6NI15 193 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 FIGNL2A6NMB9 653 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 MFNGO00587 321 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 KCNAB3O43448 404 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 CDC14BO60729 498 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 ZNF217O75362 1048 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 CRYBA1P05813 215 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 CD5P06127 495 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 MUC1P15941 1255 aaPredicted RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 SULT1A2P50226 295 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 TAS2R46P59540 309 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 SUPT4H1P63272 117 aaKnown RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 FOXK1P85037 733 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 IL15RAQ13261 267 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 PEA15Q15121 130 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 SURF2Q15527 256 aaPredicted RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 HMGN3Q15651 99 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 COX15Q7KZN9 410 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 TMEM200AQ86VY9 491 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 C15orf54Q8N8G6 183 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 KDF1Q8NAX2 398 aaPredicted RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 SFT2D1Q8WV19 159 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 C1orf147Q96MC9 270 aaPredicted RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 OR5B2Q96R09 309 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 MICU1Q9BPX6 476 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 TMEM59Q9BXS4 323 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 RAB33BQ9H082 229 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 PARP11Q9NR21 331 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 OR5AC2Q9NZP5 309 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 REV3LO60673 3130 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 RALGAPA1Q6GYQ0 2036 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 SEC16AO15027 2179 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 ADAMTS20P59510 1910 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 IGHV5-51A0A0C4DH38 117 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 A0A1W2PNV4 684 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 MEX3AA1L020 520 aaKnown RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 H3BMH7 237 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 ADAM10O14672 748 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 GAPDHP04406 335 aaKnown RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 APOBEC1P41238 236 aaKnown RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 RAB5BP61020 215 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 POU3F1Q03052 451 aaPredicted RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 PLAC9Q5JTB6 97 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 C9orf50Q5SZB4 431 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 GLIPR1L1Q6UWM5 242 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 TMPRSS9Q7Z410 1059 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 C11orf40Q8WZ69 217 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 NICN1Q9BSH3 213 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 URM1Q9BTM9 101 aaKnown RBP7.76□□□□□ -1.17
TDP1-204ENST00000545686 EGLN1Q9GZT9 426 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 SMCO4Q9NRQ5 59 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 ASH2LQ9UBL3 628 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 MMP17Q9ULZ9 603 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 DNAH14Q0VDD8 3507 aa7.76□□□□□ -1.17
TDP1-204ENST00000545686 IGKV1D-43A0A0B4J1Z2 117 aa7.75□□□□□ -1.17
TDP1-204ENST00000545686 ZNF878C9JN71 531 aa7.75□□□□□ -1.17
TDP1-204ENST00000545686 RNASEK-C17orf49H0YIS7 233 aa7.75□□□□□ -1.17
TDP1-204ENST00000545686 FBXO24O75426 580 aa7.75□□□□□ -1.17
TDP1-204ENST00000545686 MPIG6BO95866 241 aa7.75□□□□□ -1.17
TDP1-204ENST00000545686 SFTA3P0C7M3 94 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms