RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CD14P08571 375 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 GSSP48637 474 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 HMGA2P52926 109 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 SMIM11AP58511 58 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 EGR3Q06889 387 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 FAM189A2Q15884 450 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 PRAMEF6Q5VXH4 476 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
USP28-212ENST00000544750 ADGRG5Q8IZF4 528 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 Q96M85 177 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 BTBD10Q9BSF8 475 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 NRIP3Q9NQ35 241 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 FBLN5Q9UBX5 448 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 VPREB3Q9UKI3 123 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 PRSS37A4D1T9 235 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 UNC119BA6NIH7 251 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 LGALS8O00214 317 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 IMPA2O14732 288 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 GYG2O15488 501 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 NDUFB2O95178 105 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 IRF2P14316 349 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 TGFBR2P37173 567 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 PRSS12P56730 875 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 ARF6P62330 175 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 TRAP1Q12931 704 aaKnown RBP10.55□□□□□ -0.72
USP28-212ENST00000544750 PPP1R8Q12972 351 aaKnown RBP10.55□□□□□ -0.72
USP28-212ENST00000544750 KCNMB1Q16558 191 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 C11orf91Q3C1V1 193 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 KRTAP27-1Q3LI81 207 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 DNAL1Q4LDG9 190 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 ZNF770Q6IQ21 691 aaPredicted RBP10.55□□□□□ -0.72
USP28-212ENST00000544750 PGBD2Q6P3X8 592 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 METAP1DQ6UB28 335 aaPredicted RBP10.55□□□□□ -0.72
USP28-212ENST00000544750 SCCPDHQ8NBX0 429 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 OR9Q2Q8NGE9 314 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 OR11L1Q8NGX0 322 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 COQ7Q99807 217 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 CADM1Q9BY67 442 aaKnown RBP10.55□□□□□ -0.72
USP28-212ENST00000544750 SEMA6AQ9H2E6 1030 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 RASSF4Q9H2L5 321 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 WDR76Q9H967 626 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 UFSP2Q9NUQ7 469 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 RNF7Q9UBF6 113 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 AURKCQ9UQB9 309 aa10.55□□□□□ -0.72
USP28-212ENST00000544750 ADAM20O43506 726 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 OR10H3O60404 316 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 SDHAP31040 664 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 RPL4P36578 427 aaKnown RBP10.54□□□□□ -0.72
USP28-212ENST00000544750 LOXL3P58215 753 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 GK2Q14410 553 aaPredicted RBP10.54□□□□□ -0.72
USP28-212ENST00000544750 HERPUD1Q15011 391 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 SFRP4Q6FHJ7 346 aaPredicted RBP10.54□□□□□ -0.72
USP28-212ENST00000544750 SLC35E4Q6ICL7 350 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 SMARCD3Q6STE5 483 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 BTN2A1Q7KYR7 527 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 PDZD9Q8IXQ8 264 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 GALNT4Q8N4A0 578 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 FANK1Q8TC84 345 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 CFHR4Q92496 578 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 PPP1R14AQ96A00 147 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 ZNF570Q96NI8 536 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 OR52D1Q9H346 318 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 MMADHCQ9H3L0 296 aaPredicted RBP10.54□□□□□ -0.72
USP28-212ENST00000544750 KRCC1Q9NPI7 259 aaPredicted RBP10.54□□□□□ -0.72
USP28-212ENST00000544750 COA3Q9Y2R0 106 aaPredicted RBP10.54□□□□□ -0.72
USP28-212ENST00000544750 KPTNQ9Y664 436 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 LHFPL6Q9Y693 200 aa10.54□□□□□ -0.72
USP28-212ENST00000544750 AQP12BA6NM10 295 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 TNFRSF11BO00300 401 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 GSC2O15499 205 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 NDUFA2O43678 99 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 DNAJC8O75937 253 aaPredicted RBP10.53□□□□□ -0.72
USP28-212ENST00000544750 KRT36O76013 467 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 TXNDC12O95881 172 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 FBP1P09467 338 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 RAP2AP10114 183 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 EFNB2P52799 333 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 TSPAN31Q12999 210 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 KRR1Q13601 381 aaKnown RBP10.53□□□□□ -0.72
USP28-212ENST00000544750 KCNJ8Q15842 424 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 CDONQ4KMG0 1287 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 FAM98BQ52LJ0 330 aaKnown RBP10.53□□□□□ -0.72
USP28-212ENST00000544750 OR2T5Q6IEZ7 315 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 DPY19L2P2Q6ZN68 376 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 PTCHD4Q6ZW05 846 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 VMO1Q7Z5L0 202 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 GLB1L2Q8IW92 636 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 AQP12AQ8IXF9 295 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 LY6G5BQ8NDX9 201 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 OR2T29Q8NH02 315 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 NPRL2Q8WTW4 380 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 CANT1Q8WVQ1 401 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 HDHD2Q9H0R4 259 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 SYT4Q9H2B2 425 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 CNTD2Q9H8S5 307 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 VSX1Q9NZR4 365 aaPredicted RBP10.53□□□□□ -0.72
USP28-212ENST00000544750 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 GRHPRQ9UBQ7 328 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms