RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 WIPI1Q5MNZ9 446 aaPredicted RBP7.31□□□□□ -1.24
CHD4-208ENST00000540960 ABLIM2Q6H8Q1 611 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 LRFN4Q6PJG9 635 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 DCDC5Q6ZRR9 648 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 PGAP1Q75T13 922 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 GGNQ86UU5 652 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 SERPINA12Q8IW75 414 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 CCDC36Q8IYA8 594 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 ELMOD2Q8IZ81 293 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 TMEM123Q8N131 208 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 POC5Q8NA72 575 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 RELL2Q8NC24 303 aaPredicted RBP7.31□□□□□ -1.24
CHD4-208ENST00000540960 OR52H1Q8NGJ2 320 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 OR5D14Q8NGL3 314 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 OR5M9Q8NGP3 310 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 ZNRF4Q8WWF5 429 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 MED12Q93074 2177 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 TMEM106AQ96A25 262 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 MAP6Q96JE9 813 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 ADGRG7Q96K78 797 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 OR14A2Q96R54 314 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 KCNJ15Q99712 375 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 PDCD1LG2Q9BQ51 273 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 C7orf50Q9BRJ6 194 aaKnown RBP7.31□□□□□ -1.24
CHD4-208ENST00000540960 EMC6Q9BV81 110 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 BEX2Q9BXY8 128 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 SLC22A4Q9H015 551 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 RGCCQ9H4X1 137 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 LDAHQ9H6V9 325 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 EXO5Q9H790 373 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 BRD7Q9NPI1 651 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 ABCB10Q9NRK6 738 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 DDX28Q9NUL7 540 aaKnown RBP7.31□□□□□ -1.24
CHD4-208ENST00000540960 NUFIP1Q9UHK0 495 aaKnown RBP7.31□□□□□ -1.24
CHD4-208ENST00000540960 GDF2Q9UK05 429 aaPredicted RBP7.31□□□□□ -1.24
CHD4-208ENST00000540960 GTF2A1LQ9UNN4 478 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 CAMK2AQ9UQM7 478 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 GRIP1Q9Y3R0 1128 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 LRP12Q9Y561 859 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 FLVCR1Q9Y5Y0 555 aa7.31□□□□□ -1.24
CHD4-208ENST00000540960 TRGV5A0A0B4J1U4 118 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 DHRS7CA6NNS2 312 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 SMAD9O15198 467 aaKnown RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 MAGEB3O15480 346 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 TBX1O43435 398 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 SYT7O43581 403 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 CXCL13O43927 109 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 GSTT2BP0CG30 244 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 SLC2A2P11168 524 aaPredicted RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 THBS2P35442 1172 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 TGFBR1P36897 503 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 GNALP38405 381 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 TPTEP56180 551 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 NANOS3P60323 173 aaKnown RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 IL18Q14116 193 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 SGCAQ16586 387 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 CCDC92Q53HC0 331 aaPredicted RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 WDR38Q5JTN6 314 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 C1QTNF12Q5T7M4 302 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 CARD17Q5XLA6 110 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 OR7E24Q6IFN5 339 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 CNIH2Q6PI25 160 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 DOK3Q7L591 496 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 LYSMD2Q8IV50 215 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 LAX1Q8IWV1 398 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 CENPSQ8N2Z9 138 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 TMEM251Q8N6I4 163 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 ZNF433Q8N7K0 673 aaPredicted RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 SAMD12Q8N8I0 201 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 OR13C3Q8NGS6 347 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 TRMT10AQ8TBZ6 339 aaKnown RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 CCL19Q99731 98 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 NPAS1Q99742 590 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 SOSTQ9BQB4 213 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 RBM24Q9BX46 236 aaKnown RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 GSX2Q9BZM3 304 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 SRRQ9GZT4 340 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 MOV10Q9HCE1 1003 aaKnown RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 DIABLOQ9NR28 239 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 DEPPQ9NTK1 212 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 FAIMQ9NVQ4 179 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 KLHDC2Q9Y2U9 406 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 NOSIPQ9Y314 301 aaKnown RBP7.3□□□□□ -1.24
CHD4-208ENST00000540960 EMC9Q9Y3B6 208 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 TIMM10BQ9Y5J6 103 aa7.3□□□□□ -1.24
CHD4-208ENST00000540960 A0A0U1RQV5 110 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 OR6C6A6NF89 314 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ZNF716A6NP11 495 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ZNF587BE7ETH6 402 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 RPL36A-HNRNPH2H7BZ11 118 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 TFECO14948 347 aaPredicted RBP7.29□□□□□ -1.24
CHD4-208ENST00000540960 CTDSPLO15194 276 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 HPGDSO60760 199 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ECDO95905 644 aaPredicted RBP7.29□□□□□ -1.24
CHD4-208ENST00000540960 OPN1LWP04000 364 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 YES1P07947 543 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms