RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 MRPL15Q9P015 296 aaKnown RBP11.72□□□□□ -0.53
SNHG1-213ENST00000540725 CD300AQ9UGN4 299 aa11.72□□□□□ -0.53
SNHG1-213ENST00000540725 COMMD3-BMI1R4GMX3 469 aa11.72□□□□□ -0.53
SNHG1-213ENST00000540725 TRAV38-1A0A0B4J264 116 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 A0A1B0GUS0 222 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 OOEPA6NGQ2 149 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 A6NLC8 198 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.53
SNHG1-213ENST00000540725 NDUFA2O43678 99 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 TOX4O94842 621 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 KNG1P01042 644 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 CRYBA1P05813 215 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 LIPFP07098 398 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 SLC2A1P11166 492 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 MMP9P14780 707 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 PRKXP51817 358 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 RAG2P55895 527 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 ZNF362Q5T0B9 420 aaPredicted RBP11.71□□□□□ -0.53
SNHG1-213ENST00000540725 FIP1L1Q6UN15 594 aaKnown RBP11.71□□□□□ -0.53
SNHG1-213ENST00000540725 PGAM4Q8N0Y7 254 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 SPERTQ8NA61 448 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 OR56B2PQ8NGI1 322 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 OR4C15Q8NGM1 316 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 OR8D4Q8NGM9 314 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 OR9Q1Q8NGQ5 310 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 CDRT15Q96T59 188 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 BTBD10Q9BSF8 475 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 CHIAQ9BZP6 476 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 BEX1Q9HBH7 125 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 LYVE1Q9Y5Y7 322 aa11.71□□□□□ -0.53
SNHG1-213ENST00000540725 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.7□□□□□ -0.54
SNHG1-213ENST00000540725 CENPVL3A0A0U1RRI6 287 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 hCG_1807616A0A1W2PRN6 198 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 SNX3O60493 162 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 KRT36O76013 467 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 GYPAP02724 150 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 GRPP07492 148 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 MELTFP08582 738 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 SPARCP09486 303 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 ENTPD1P49961 510 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 HMGA2P52926 109 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 TAF13Q15543 124 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 METTL11BQ5VVY1 283 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 ZNF826PQ6ZT77 177 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 LNX2Q8N448 690 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 TMEM86BQ8N661 226 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 PNLDC1Q8NA58 520 aaKnown RBP11.7□□□□□ -0.54
SNHG1-213ENST00000540725 SLC37A3Q8NCC5 494 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 OR4F5Q8NH21 305 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 WFDC12Q8WWY7 111 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 GATAD2BQ8WXI9 593 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 SLAMF6Q96DU3 332 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 FAM71F1Q96KD3 344 aaPredicted RBP11.7□□□□□ -0.54
SNHG1-213ENST00000540725 WDFY2Q96P53 400 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 RASSF4Q9H2L5 321 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 OPA3Q9H6K4 179 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 CENPMQ9NSP4 180 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 IL20Q9NYY1 176 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 C1RLQ9NZP8 487 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 N6AMT1Q9Y5N5 214 aa11.7□□□□□ -0.54
SNHG1-213ENST00000540725 ZNF878C9JN71 531 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 TNFRSF11BO00300 401 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 ATP8B1O43520 1251 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 XRCC2O43543 280 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 FCN3O75636 299 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 FMO3P31513 532 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 RELBQ01201 579 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 DEFA6Q01524 100 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 SRSF4Q08170 494 aaKnown RBP11.69□□□□□ -0.54
SNHG1-213ENST00000540725 MZT1Q08AG7 82 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 CRMP1Q14194 572 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 PCK2Q16822 640 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 C17orf107Q6ZR85 190 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 RASSF6Q6ZTQ3 369 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 LINC00471Q8N535 108 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 KIR3DL3Q8N743 410 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 ZNF511Q8NB15 262 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 SSMEM1Q8WWF3 244 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 KCNJ15Q99712 375 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 SIRPDQ9H106 197 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 TBC1D23Q9NUY8 699 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 C14orf119Q9NWQ9 140 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 POMT1Q9Y6A1 747 aa11.69□□□□□ -0.54
SNHG1-213ENST00000540725 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 DVL1O14640 695 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 NDUFA7O95182 113 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 IGHV1-69P01742 117 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 GYPBP06028 91 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 SPI1P17947 270 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 DDOSTP39656 456 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 POU4F2Q12837 409 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 PDCD1Q15116 288 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 OLFML2AQ68BL7 652 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 ZNF770Q6IQ21 691 aaPredicted RBP11.68□□□□□ -0.54
SNHG1-213ENST00000540725 BTN2A1Q7KYR7 527 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 LHX4Q969G2 390 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 SPSB4Q96A44 273 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 TSSK6Q9BXA6 273 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms