RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 DPRXA6NFQ7 191 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ZNF879B4DU55 563 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 LOC110117498-PIK3R3F6TDL0 507 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 SYNGR3O43761 229 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ISG15P05161 165 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 CBR1P16152 277 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ZNF32P17041 273 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 CALRP27797 417 aaKnown RBP9.17□□□□□ -0.94
ATL3-204ENST00000540699 HOXC12P31275 282 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 UBE2NP61088 152 aaKnown RBP9.17□□□□□ -0.94
ATL3-204ENST00000540699 SCRN3Q0VDG4 424 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 RAB35Q15286 201 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ZNF404Q494X3 552 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 Q499Y3 187 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ZNF544Q6NX49 715 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 LINC00299Q6ZSB3 139 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 SLC16A14Q7RTX9 510 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 DPPA2Q7Z7J5 298 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.17□□□□□ -0.94
ATL3-204ENST00000540699 SKA3Q8IX90 412 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ELMOD2Q8IZ81 293 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ZNF676Q8N7Q3 588 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 OR10AC1Q8NH08 325 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 PPP1R14AQ96A00 147 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 PLPPR2Q96GM1 343 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 DERL3Q96Q80 235 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 HS3ST6Q96QI5 342 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 KCNJ15Q99712 375 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ATF6BQ99941 703 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 COMMD4Q9H0A8 199 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 HDHD2Q9H0R4 259 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 WNT5BQ9H1J7 359 aa9.17□□□□□ -0.94
ATL3-204ENST00000540699 ESRP2Q9H6T0 727 aaKnown RBP9.17□□□□□ -0.94
ATL3-204ENST00000540699 A0A075B6Q4 140 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 TRAV1-2A0A0B4J238 106 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 A0A0G2JK05 382 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 ACOD1A6NK06 481 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 SGCEO43556 437 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 UBL3O95164 117 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 FARS2O95363 451 aaKnown RBP9.16□□□□□ -0.94
ATL3-204ENST00000540699 IGLV3-1P01715 115 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 HLA-HP01893 362 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 TTRP02766 147 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 INHBBP09529 407 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 ACHEP22303 614 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 ANOS1P23352 680 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 PTAFRP25105 342 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 CD40P25942 277 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 HSD11B1P28845 292 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 ARR3P36575 388 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 MAGEB1P43366 347 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 ZNF121P58317 390 aaPredicted RBP9.16□□□□□ -0.94
ATL3-204ENST00000540699 PCBD1P61457 104 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 PSG4Q00888 419 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 BSPH1Q075Z2 132 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 ADAM5Q6NVV9 412 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 TMEM108Q6UXF1 575 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 MDP1Q86V88 176 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 TMEM200AQ86VY9 491 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 NR2C2APQ86WQ0 139 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 RDH10Q8IZV5 341 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 OR51A4Q8NGJ6 313 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 OR6Q1Q8NGQ2 317 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 GPR148Q8TDV2 347 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 NANOS1Q8WY41 292 aaKnown RBP9.16□□□□□ -0.94
ATL3-204ENST00000540699 PIK3IP1Q96FE7 263 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 POM121Q96HA1 1249 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 OR2H1Q9GZK4 316 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 PBOV1Q9GZY1 135 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 CLEC4MQ9H2X3 399 aaPredicted RBP9.16□□□□□ -0.94
ATL3-204ENST00000540699 PLEKHF2Q9H8W4 249 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 NOX3Q9HBY0 568 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 NOX4Q9NPH5 578 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 SNTG1Q9NSN8 517 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 PLEK2Q9NYT0 353 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 ATPIF1Q9UII2 106 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 TIMM10BQ9Y5J6 103 aa9.16□□□□□ -0.94
ATL3-204ENST00000540699 PRRC2AP48634 2157 aaKnown RBP9.15□□□□□ -0.94
ATL3-204ENST00000540699 IGHV1-18A0A0C4DH31 117 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 IQCMA0A1B0GVH7 501 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 LOC107986453A0A1B0GWG9 222 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 DOK2O60496 412 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 ARL6IP5O75915 188 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 RAF1P04049 648 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 CD3EP07766 207 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 ACSM4P0C7M7 580 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 PATE4P0C8F1 98 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 UBCP0CG48 685 aaKnown RBP9.15□□□□□ -0.94
ATL3-204ENST00000540699 ZNF14P17017 642 aaPredicted RBP9.15□□□□□ -0.94
ATL3-204ENST00000540699 CCL1P22362 96 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 MYL9P24844 172 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 MAPK3P27361 379 aaPredicted RBP9.15□□□□□ -0.94
ATL3-204ENST00000540699 CX3CR1P49238 355 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 RORCP51449 518 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 ZNF83P51522 516 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 PRKXP51817 358 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 MXD1Q05195 221 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 ECH1Q13011 328 aa9.15□□□□□ -0.94
ATL3-204ENST00000540699 HNRNPA0Q13151 305 aaKnown RBP9.15□□□□□ -0.94
ATL3-204ENST00000540699 TAF13Q15543 124 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms