RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NSUN5P2Q63ZY6 315 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 OR52N4Q8NGI2 321 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 OR56B1Q8NGI3 324 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 OR2I1PQ8NGU4 316 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 ZNF519Q8TB69 540 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 RTBDNQ9BSG5 229 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 FAM212BQ9NTI7 297 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 FBLN5Q9UBX5 448 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 ZNF217O75362 1048 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 ADH1BP00325 375 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 BGLAPP02818 100 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 ARG1P05089 322 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 NME1P15531 152 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 PI3P19957 117 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 RPL12P30050 165 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 CLDN6P56747 220 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 SRSF5Q13243 272 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 MIDNQ504T8 468 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 PYY3Q5JQD4 70 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 OR2A2Q6IF42 318 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 OR9A4Q8NGU2 314 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 SGK3Q96BR1 496 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 OR10A5Q9H207 317 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 CHRDQ9H2X0 955 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 FBXL17Q9UF56 701 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 ARID1BQ8NFD5 2236 aaPredicted RBP16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 LINC01553A4QN01 128 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 UMAD1C9J7I0 102 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 K7EPK0 472 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 IFNA2P01563 188 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 CA3P07451 260 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 FREM3P0C091 2139 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 WASP42768 502 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 RAB1AP62820 205 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 ZP2Q05996 745 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 OPN5Q6U736 354 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 MED25Q71SY5 747 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 Q7L0L9 218 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 FAM71E2Q8N5Q1 922 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 MRPL43Q8N983 215 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 ZNF565Q8N9K5 539 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 SPPL3Q8TCT6 385 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 NRSN2Q9GZP1 204 aa16.54■□□□□ 0.24
SFSWAP-207ENST00000538548 C2orf74A8MZ97 194 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 ZNF708P17019 499 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 THBS4P35443 961 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 PDGFRLQ15198 375 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 Q3ZCU0 254 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 PTCRAQ6ISU1 281 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 HIST2H3AQ71DI3 136 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 RTN4RL2Q86UN3 420 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 PPP1R3BQ86XI6 285 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 TMEM151BQ8IW70 566 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 ZNF615Q8N8J6 731 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 CNTNAP3Q9BZ76 1288 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 TMEM269A0A1B0GVZ9 245 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 A0A1W2PPE2 198 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 P2RY10O00398 339 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 CHRM2P08172 466 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 CDX1P47902 265 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 GLO1Q04760 184 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 ZNF239Q16600 458 aaKnown RBP16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 FAM160A2Q8N612 972 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 UBAC2Q8NBM4 344 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 OIT3Q8WWZ8 545 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 FGGYQ96C11 551 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 DGAT2Q96PD7 388 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 CCDC3Q9BQI4 270 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 CUTCQ9NTM9 273 aa16.53■□□□□ 0.24
SFSWAP-207ENST00000538548 TMEM14DPA8MWL7 114 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 SCDO00767 359 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 GSTP1P09211 210 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 ACTR1BP42025 376 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 P2RY4P51582 365 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 EMP2P54851 167 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 SPEM2Q0P670 501 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 C2orf27AQ580R0 203 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 PSRC1Q6PGN9 363 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 CHRDL2Q6WN34 429 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 FOXRED2Q8IWF2 684 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 LILRB2Q8N423 598 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 CCL4L1Q8NHW4 92 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 EIF5A2Q9GZV4 153 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 UFSP2Q9NUQ7 469 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 SLC5A6Q9Y289 635 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 AMDHD2Q9Y303 409 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 BRWD1Q9NSI6 2320 aa16.52■□□□□ 0.24
SFSWAP-207ENST00000538548 TRAV36DV7A0A075B6V5 113 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 SFTPBP07988 381 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 HNRNPA1P09651 372 aaKnown RBP eCLIP16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 RPS2P15880 293 aaKnown RBP16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 FCGR2CP31995 323 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 GNALP38405 381 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 TMEM33P57088 247 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 FUT7Q11130 342 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 SGCBQ16585 318 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 OR1E3Q8WZA6 343 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 NICN1Q9BSH3 213 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 TXNIPQ9H3M7 391 aa16.52■□□□□ 0.23
SFSWAP-207ENST00000538548 PTGES2Q9H7Z7 377 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms