RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TMPPEQ6ZT21 453 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 FAM219AQ8IW50 185 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 IQCF2Q8IXL9 164 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 ZBED8Q8IZ13 594 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 RIBC1Q8N443 379 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 KIR3DL3Q8N743 410 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 OR4M2Q8NGB6 313 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 OR4C15Q8NGM1 316 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 CDC26Q8NHZ8 85 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 KIF18AQ8NI77 898 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 NANPQ8TBE9 248 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 GRK7Q8WTQ7 553 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 CKAP2Q8WWK9 683 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 ATP6V1E2Q96A05 226 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 VPS33AQ96AX1 596 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 TMIGD2Q96BF3 282 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 C16orf58Q96GQ5 468 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 NEDD4LQ96PU5 975 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 CITED1Q99966 193 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 NAA11Q9BSU3 229 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 ACPTQ9BZG2 426 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 PARLQ9H300 379 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 FN3KQ9H479 309 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF442Q9H7R0 627 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF665Q9H7R5 613 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 GNB4Q9HAV0 340 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 C3orf14Q9HBI5 128 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 DYNLRB1Q9NP97 96 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 UBQLN4Q9NRR5 601 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 GIN1Q9NXP7 522 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 VPS29Q9UBQ0 182 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 SOX21Q9Y651 276 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 IGHV2OR16-5A0A0B4J2B6 119 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 A8MXK9 166 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 SRRM5B3KS81 715 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 SULT2B1O00204 365 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 PGRMC1O00264 195 aaKnown RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 SLC1A7O00341 560 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 MANBAO00462 879 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 PPIHO43447 177 aaKnown RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 NXPH4O95158 308 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 LGI1O95970 557 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 C2P06681 752 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 RPS17P08708 135 aaKnown RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 HPGDP15428 266 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 NPR2P20594 1047 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 CRABP2P29373 138 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 ALDH3B1P43353 468 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 C2orf80Q0P641 193 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 BAMBIQ13145 260 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 TMED1Q13445 227 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 MAD2L1BPQ15013 274 aaPredicted RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF311Q5JNZ3 666 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 KLF17Q5JT82 389 aaPredicted RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 AVPI1Q5T686 147 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 ASPHD2Q6ICH7 369 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 FAM71E1Q6IPT2 247 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 ACSM5Q6NUN0 579 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 SYT10Q6XYQ8 523 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 PIGWQ7Z7B1 504 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 C10orf67Q8IYJ2 551 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 ABHD12Q8N2K0 398 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 TEX29Q8N6K0 151 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 TMCO5AQ8N6Q1 288 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 CDRT4Q8N9R6 151 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 SYT14Q8NB59 555 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 OR4F15Q8NGB8 312 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 OR1K1Q8NGR3 316 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 CIDECQ96AQ7 238 aaPredicted RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 ARL5BQ96KC2 179 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 KCNS3Q9BQ31 491 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 MRPL37Q9BZE1 423 aaKnown RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 OR11A1Q9GZK7 315 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 MYEF2Q9P2K5 600 aaKnown RBP4.18□□□□□ -1.74
CLIP1-207ENST00000536634 CTSZQ9UBR2 303 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 FLVCR1Q9Y5Y0 555 aa4.18□□□□□ -1.74
CLIP1-207ENST00000536634 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 RYR1P21817 5038 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 MDFIC2A0A1B0GVS7 189 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 ERICH4A6NGS2 130 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 OR6C65A6NJZ3 312 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 CLDN34H7C241 214 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 J3QLI3 93 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 M0R233 179 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 BCAS1O75363 584 aaPredicted RBP4.17□□□□□ -1.74
CLIP1-207ENST00000536634 SAP30O75446 220 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 OR4F21O95013 312 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 KLHL2O95198 593 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 HPRP00739 348 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 IGKV3-15P01624 115 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 IGHV2-5P01817 119 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 ANXA4P09525 319 aaPredicted RBP4.17□□□□□ -1.74
CLIP1-207ENST00000536634 PRPS2P11908 318 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 NTSP30990 170 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 SPRP35270 261 aaPredicted RBP4.17□□□□□ -1.74
CLIP1-207ENST00000536634 CCR4P51679 360 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 TMEM33P57088 247 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 H3F3AP84243 136 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 TGFBR3Q03167 851 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF763Q0D2J5 394 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms