RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 DUSP13Q9UII6 198 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 A4GNTQ9UNA3 340 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 GMPPBQ9Y5P6 360 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 MALRD1Q5VYJ5 2156 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A1B0GVI7 797 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A1W2PQ09 198 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 SLC22A23A1A5C7 686 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 RNF212BA8MTL3 300 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 MPTX1A8MV57 137 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 F8W036 122 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 J3KTA2 159 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 CXCR6O00574 342 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 GNGT2O14610 69 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 XPNPEP2O43895 674 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 IFNW1P05000 195 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 LCKP06239 509 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 CDK1P06493 297 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 SAGP10523 405 aaPredicted RBP7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 GIFP27352 417 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 IL2RGP31785 369 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 CDAP32320 146 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 RGS6P49758 472 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 ARHGDIAP52565 204 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 HSF2Q03933 536 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 PLP2Q04941 152 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 FMODQ06828 376 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 DGCR6Q14129 220 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 HIST3H3Q16695 136 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 TBC1D28Q2M2D7 210 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 NRN1LQ496H8 165 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 ALG10Q5BKT4 473 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 ZMAT1Q5H9K5 638 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 C10orf128Q5T292 105 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 DPPA2Q7Z7J5 298 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 NRMQ8IXM6 262 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 TIGD4Q8IY51 512 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 LILRB2Q8N423 598 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 OR1J2Q8NGS2 313 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 LIPHQ8WWY8 451 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 GEMIN6Q8WXD5 167 aaKnown RBP7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 BPIFA2Q96DR5 249 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 SEPHS2Q99611 448 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 SOX7Q9BT81 388 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 FNDC11Q9BVV2 318 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 MRPL13Q9BYD1 178 aaKnown RBP7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 TXNIPQ9H3M7 391 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 MS4A5Q9H3V2 200 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 C1orf198Q9H425 327 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 SMURF2Q9HAU4 748 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 RBFOX1Q9NWB1 397 aaKnown RBP7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 ADAM30Q9UKF2 790 aa7.33□□□□□ -1.24
SFSWAP-202ENST00000535202 TRAV27A0A087WT01 109 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 IGKV1D-43A0A0B4J1Z2 117 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A0B4J203 849 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A0B4J293 547 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 hCG_1807616A0A1W2PRN6 198 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 AKR7A2O43488 359 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 LILRA1O75019 489 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 APOL3O95236 402 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 SERPINA1P01009 418 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 TGFAP01135 160 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 PTHP01270 115 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 HPXP02790 462 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 IFNA4P05014 189 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 H2AFB1P0C5Y9 115 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 H2AFB2P0C5Z0 115 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 TSPAN19P0C672 248 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 NR2C1P13056 603 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF250P15622 560 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 SRD5A1P18405 259 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 MAKP20794 623 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 CCNOP22674 350 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 APEX1P27695 318 aaKnown RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 APLNRP35414 380 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 MAP2K3P46734 347 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 RORCP51449 518 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF133P52736 654 aaPredicted RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 SELENOVP59797 346 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 CTXN1P60606 82 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 RPL27P61353 136 aaKnown RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 ERVS71-1P61550 626 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 DBPQ10586 325 aaPredicted RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 TRAM2Q15035 370 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 SGCAQ16586 387 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 TATDN3Q17R31 274 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 NKPD1Q17RQ9 610 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 IFI44LQ53G44 452 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 IGSF11Q5DX21 431 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 ELFN2Q5R3F8 820 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 FAM120AOSQ5T036 256 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 FIP1L1Q6UN15 594 aaKnown RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 KRT74Q7RTS7 529 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 CLDN22Q8N7P3 220 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 DTX3Q8N9I9 347 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 CLRN3Q8NCR9 226 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 OR13C2Q8NGS9 318 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 OR51A7Q8NH64 312 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms