RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 SCIMPQ6UWF3 145 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CD300LGQ6UXG3 332 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 HSD17B13Q7Z5P4 300 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ANGPTL5Q86XS5 388 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RBM45Q8IUH3 476 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 OR10H4Q8NGA5 316 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ZFP90Q8TF47 636 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 SMAP2Q8WU79 429 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CCDC124Q96CT7 223 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 LINC00052Q96N35 136 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 COL21A1Q96P44 957 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 IL4I1Q96RQ9 567 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 HSD17B14Q9BPX1 270 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 THTPAQ9BU02 230 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CCDC32Q9BV29 185 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 UGT2B28Q9BY64 529 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ANGPTL4Q9BY76 406 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 WDR41Q9HAD4 459 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUX4Q9UBX2 424 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 LGALS13Q9UHV8 139 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RNF6Q9Y252 685 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RNF11Q9Y3C5 154 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 HSPB11Q9Y547 144 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 USP42Q9H9J4 1324 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PNMA8CA0A1B0GUJ8 204 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 FAM74A7A6NL05 159 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 K7EP13 123 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CHST10O43529 356 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 LATO43561 262 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GGCTO75223 188 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 KHDRBS3O75525 346 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TOXO94900 526 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 VAPBO95292 243 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 IGF1P05019 195 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PATE4P0C8F1 98 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GIMD1P0DJR0 217 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MYOGP15173 224 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 NQO2P16083 231 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GNB3P16520 340 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 NELFEP18615 380 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PVALBP20472 110 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MMP11P24347 488 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GPR183P32249 361 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ETV6P41212 452 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ZFP36L2P47974 494 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CCR6P51684 374 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PRKXP51817 358 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ACLYP53396 1101 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 EMP2P54851 167 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ARPP19P56211 112 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OSTNP61366 133 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GNB1P62873 340 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 DYNLL1P63167 89 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GTF2BQ00403 316 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TLE4Q04727 773 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GUCA2BQ16661 112 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 KRTAP24-1Q3LI83 254 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 FAM74A3Q4VXF1 159 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 C14orf28Q4W4Y0 310 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GPRC6AQ5T6X5 926 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 LGSNQ5TDP6 509 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 RNLSQ5VYX0 342 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR52W1Q6IF63 320 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 LEG1Q6P5S2 330 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 BAIAP2L2Q6UXY1 529 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 RASSF6Q6ZTQ3 369 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TIPARPQ7Z3E1 657 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 KLHDC8BQ8IXV7 354 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CPNE9Q8IYJ1 553 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 STPG2Q8N412 459 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 RAB42Q8N4Z0 105 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CLDN19Q8N6F1 224 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM178AQ8NBL3 297 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR7G2Q8NG99 324 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR4F17Q8NGA8 305 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR9Q2Q8NGE9 314 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR4D6Q8NGJ1 314 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR9G4Q8NGQ1 327 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR4F5Q8NH21 305 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MRGPRFQ96AM1 343 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 RAB3CQ96E17 227 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 Q96MT0 163 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 NOL4LQ96MY1 436 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR4F4Q96R69 305 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CPXM1Q96SM3 734 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 EBF4Q9BQW3 602 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OVOL2Q9BRP0 275 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM208Q9BTX3 173 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 RPP25Q9BUL9 199 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 RAB1BQ9H0U4 201 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 SLITRK2Q9H156 845 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 NMNAT1Q9HAN9 279 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PLEKHA3Q9HB20 300 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MYOZ2Q9NPC6 264 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM138Q9NPI0 162 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 SLC17A5Q9NRA2 495 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 C14orf105Q9NVL8 296 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 KLK11Q9UBX7 282 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OPN4Q9UHM6 478 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PHF11Q9UIL8 331 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms