RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 TRAV18A0A075B6X5 111 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 A6NL46 340 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 H7C417 338 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 SSNA1O43805 119 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 ZG16O60844 167 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 TGM6O95932 706 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 OPN1LWP04000 364 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 AKAIN1P0CW23 69 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 COX6B1P14854 86 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 GABRA1P14867 456 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 RAB3AP20336 220 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 MSR1P21757 451 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 CYB561P49447 251 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 GZMKP49863 264 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 SGCAQ16586 387 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 GLYATL3Q5SZD4 288 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 C10orf128Q5T292 105 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 FAM166AQ6J272 317 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 H3F3CQ6NXT2 135 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 CORO6Q6QEF8 472 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 DNM1P46Q6ZS02 220 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 CREB3L2Q70SY1 520 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 MDGA2Q7Z553 956 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 SLC22A24Q8N4F4 322 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
USF1-208ENST00000528768 CLEC1AQ8NC01 280 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 GJC3Q8NFK1 279 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 OR1M1Q8NGA1 313 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 OR14L1PQ8NHC6 308 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 TMEM54Q969K7 222 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 FER1L6-AS2Q96M78 137 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 GNRHR2Q96P88 292 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 GON7Q9BXV9 100 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 C20orf85Q9H1P6 137 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 GHITMQ9H3K2 345 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 MTFP1Q9UDX5 166 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 ZNF107Q9UII5 783 aaPredicted RBP10.37□□□□□ -0.75
USF1-208ENST00000528768 ZNF222Q9UK12 451 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 FBXL3Q9UKT7 428 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 RAB22AQ9UL26 194 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 BOKQ9UMX3 212 aaPredicted RBP10.37□□□□□ -0.75
USF1-208ENST00000528768 OSGIN2Q9Y236 505 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 HRH3Q9Y5N1 445 aa10.37□□□□□ -0.75
USF1-208ENST00000528768 ANKHD1Q8IWZ3 2542 aaKnown RBP10.36□□□□□ -0.75
USF1-208ENST00000528768 IGKV1D-43A0A0B4J1Z2 117 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 TMEM272A0A1B0GTI8 110 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 LOC390937A0A1W2PQ73 354 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 H3BSH0 61 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 CDK2AP1O14519 115 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ZIC3O60481 467 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 BPNT1O95861 308 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 IL5P05113 134 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ITGA5P08648 1049 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ACSM4P0C7M7 580 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ENPP1P22413 925 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 SSTR2P30874 369 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 CCR6P51684 374 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ZNF133P52736 654 aaPredicted RBP10.36□□□□□ -0.75
USF1-208ENST00000528768 RAC3P60763 192 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 H3F3AP84243 136 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 FAPQ12884 760 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 GSG1Q2KHT4 349 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 PCGF3Q3KNV8 242 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ACER2Q5QJU3 275 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 OTPQ5XKR4 325 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 SFRP4Q6FHJ7 346 aaPredicted RBP10.36□□□□□ -0.75
USF1-208ENST00000528768 MTFR2Q6P444 385 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 Q6ZS92 163 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 DOK3Q7L591 496 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 COMMD2Q86X83 199 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ZNF283Q8N7M2 679 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 PLPP7Q8NBV4 271 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 OR9K2Q8NGE7 335 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ZFAND1Q8TCF1 268 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 GIMAP1Q8WWP7 306 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 ITFG2Q969R8 447 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 FAM46BQ96A09 425 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 FGGYQ96C11 551 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 FYTTD1Q96QD9 318 aaKnown RBP10.36□□□□□ -0.75
USF1-208ENST00000528768 NELFAQ9H3P2 528 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 P4HTMQ9NXG6 502 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 PAQR5Q9NXK6 330 aaPredicted RBP10.36□□□□□ -0.75
USF1-208ENST00000528768 B4GALT7Q9UBV7 327 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 DCHS2Q6V1P9 2916 aa10.36□□□□□ -0.75
USF1-208ENST00000528768 UBE2QL1A1L167 161 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 DHHO43323 396 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 NDUFB6O95139 128 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 TTRP02766 147 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 LPLP06858 475 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 UBBP0CG47 229 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 C4BPBP20851 252 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 CNR1P21554 472 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 S100A1P23297 94 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 CTSSP25774 331 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 GSK3AP49840 483 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 SUCLG1P53597 346 aaKnown RBP10.35□□□□□ -0.75
USF1-208ENST00000528768 CARD18P57730 90 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 TAS2R19P59542 299 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 OC90Q02509 493 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms