RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 DAOP14920 347 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 GCH1P30793 250 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 GLRXP35754 106 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 GDI2P50395 445 aaKnown RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 IL13RA1P78552 427 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 SNCBQ16143 134 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 TBC1D28Q2M2D7 210 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 ALKBH6Q3KRA9 238 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 C6orf141Q5SZD1 244 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 LCN1P1Q5VSP4 162 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 KRT80Q6KB66 452 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 LRRN1Q6UXK5 716 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 C1orf229Q6ZS94 237 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 RFPL4BQ6ZWI9 263 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 LRP11Q86VZ4 500 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 C8orf59Q8N0T1 100 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 OR2T27Q8NH04 317 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 RFKQ969G6 155 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 MARS2Q96GW9 593 aaKnown RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 C4orf45Q96LM5 186 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 SIGLEC11Q96RL6 698 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 SLC6A7Q99884 636 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 ATF6BQ99941 703 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 C1QTNF5Q9BXJ0 243 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 TTTY10Q9BZA0 68 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 RAB1BQ9H0U4 201 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 FGF20Q9NP95 211 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 CA10Q9NS85 328 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 CENPMQ9NSP4 180 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 TBCCD1Q9NVR7 557 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 PAK1IP1Q9NWT1 392 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 MYEF2Q9P2K5 600 aaKnown RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 RAB26Q9ULW5 256 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 POLR1DQ9Y2S0 133 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 B9A039 149 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 LIMS3P0CW19 117 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 LIMS4P0CW20 117 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 CCNOP22674 350 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 APLNRP35414 380 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 SERPINF1P36955 418 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 CXCR4P61073 352 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 GALK2Q01415 458 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 ECH1Q13011 328 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 EFNB3Q15768 340 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 SNAI3Q3KNW1 292 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 C1QL2Q7Z5L3 287 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF485Q8NCK3 441 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 SETD9Q8NE22 299 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 OR1J2Q8NGS2 313 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 NEU4Q8WWR8 484 aaPredicted RBP9.25□□□□□ -0.93
NEDD8-204ENST00000526430 Q96MT0 163 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 DCLRE1CQ96SD1 692 aaKnown RBP9.25□□□□□ -0.93
NEDD8-204ENST00000526430 TBX5Q99593 518 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 DOK1Q99704 481 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 JAM3Q9BX67 310 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 RASSF4Q9H2L5 321 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 MMP27Q9H306 513 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 VCXQ9H320 206 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 VCX3BQ9H321 246 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 PLK3Q9H4B4 646 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF442Q9H7R0 627 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 ZMAT3Q9HA38 289 aaKnown RBP9.25□□□□□ -0.93
NEDD8-204ENST00000526430 CDH20Q9HBT6 801 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 PSORS1C1Q9UIG5 152 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 LRP12Q9Y561 859 aa9.25□□□□□ -0.93
NEDD8-204ENST00000526430 IGLV3-9A0A075B6K5 115 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 TRAV20A0A0B4J274 112 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF878C9JN71 531 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 F5H5K5 113 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 CLPTM1O96005 669 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 ERCC1P07992 297 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-204ENST00000526430 SLC2A1P11166 492 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF250P15622 560 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 MPV17P39210 176 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 PRKXP51817 358 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 RAB40BQ12829 278 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 POU4F2Q12837 409 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 SNTB2Q13425 540 aaKnown RBP9.24□□□□□ -0.93
NEDD8-204ENST00000526430 TUSC1Q2TAM9 212 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 DEGS2Q6QHC5 323 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF322Q6U7Q0 402 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-204ENST00000526430 PLEKHG7Q6ZR37 379 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF679Q8IYX0 411 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 BPIFB2Q8N4F0 458 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 OR51F2Q8NH61 342 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 SLC25A40Q8TBP6 338 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 SGK3Q96BR1 496 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 MNTQ99583 582 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF184Q99676 751 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-204ENST00000526430 MRPL37Q9BZE1 423 aaKnown RBP9.24□□□□□ -0.93
NEDD8-204ENST00000526430 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 OR51B6Q9H340 312 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 DUSP21Q9H596 190 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 ELOVL3Q9HB03 270 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 G6PC2Q9NQR9 355 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 CLEC2DQ9UHP7 191 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 LAMP5Q9UJQ1 280 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms