RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PHEXP78562 749 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 CD226Q15762 336 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 UGT3A2Q3SY77 523 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 WBP2NLQ6ICG8 309 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 RNF165Q6ZSG1 346 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 CCDC91Q7Z6B0 441 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 TCAIMQ8N3R3 496 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 RNF175Q8N4F7 328 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 OR4X2Q8NGF9 303 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 OR9A2Q8NGT5 310 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 OCC1Q8TAD7 63 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 GEMIN6Q8WXD5 167 aaKnown RBP5.38□□□□□ -1.55
NEDD8-203ENST00000524927 BSCL2Q96G97 398 aaPredicted RBP5.38□□□□□ -1.55
NEDD8-203ENST00000524927 P2RX4Q99571 388 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 CDCA4Q9BXL8 241 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 LINC00470Q9BZP3 86 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 WDR83OSQ9Y284 106 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 TRAPPC4Q9Y296 219 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 HYOU1Q9Y4L1 999 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 A0A1B0GVI7 797 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 DUXAA6NLW8 204 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 NPFFO15130 113 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 STK16O75716 305 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 SEMA3DO95025 777 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 ETS1P14921 441 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 EPORP19235 508 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 FKBP2P26885 142 aaKnown RBP5.37□□□□□ -1.55
NEDD8-203ENST00000524927 SOAT1P35610 550 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 ELK3P41970 407 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 VDAC2P45880 294 aaPredicted RBP5.37□□□□□ -1.55
NEDD8-203ENST00000524927 CLK1P49759 484 aaKnown RBP5.37□□□□□ -1.55
NEDD8-203ENST00000524927 CDKN2DP55273 166 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 MTCP1P56278 107 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
NEDD8-203ENST00000524927 ERVFC1-1P60608 527 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 GLO1Q04760 184 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 QPRTQ15274 297 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 ATP6AP1LQ52LC2 224 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 SPRNQ5BIV9 151 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 RNLSQ5VYX0 342 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 CBLN3Q6UW01 205 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 FRA10AC1Q70Z53 315 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 NRARPQ7Z6K4 114 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 GPR137CQ8N3F9 429 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 OR9K2Q8NGE7 335 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 ST6GALNAC6Q969X2 333 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 ZNF524Q96C55 264 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 SAMD8Q96LT4 415 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 ZNF649Q9BS31 505 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 NANSQ9NR45 359 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 SENP1Q9P0U3 644 aa5.37□□□□□ -1.55
NEDD8-203ENST00000524927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.37□□□□□ -1.55
NEDD8-203ENST00000524927 A0A1B0GUV1 79 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 A0A1W2PPK0 400 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ZNF320A2RRD8 509 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ZSCAN5BA6NJL1 495 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 TAPBPO15533 448 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 UPK3AO75631 287 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 PSMG1O95456 288 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 HLA-HP01893 362 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 RLN1P04808 185 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 SPP1P10451 314 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 GABRA3P34903 492 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 SLC35A1P78382 337 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 TNFAIP6P98066 277 aaPredicted RBP5.36□□□□□ -1.55
NEDD8-203ENST00000524927 RBBP4Q09028 425 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ILF2Q12905 390 aaKnown RBP5.36□□□□□ -1.55
NEDD8-203ENST00000524927 TAF13Q15543 124 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 LRRC75BQ2VPJ9 315 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 CCNYL2Q5T2Q4 361 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ZNF841Q6ZN19 808 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 TMEM182Q6ZP80 229 aaPredicted RBP5.36□□□□□ -1.55
NEDD8-203ENST00000524927 PAGE2Q7Z2X7 111 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ADAMTSL2Q86TH1 951 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 RTN4RL2Q86UN3 420 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 MMD2Q8IY49 270 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 NHLRC2Q8NBF2 726 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ITLN1Q8WWA0 313 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ST8SIA1Q92185 356 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 MAGEB18Q96M61 343 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 EPYCQ99645 322 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 ARHGDIGQ99819 225 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 TMEM246Q9BRR3 403 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 OSBPL8Q9BZF1 889 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 SLC19A3Q9BZV2 496 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 GSN-AS1Q9NRJ2 163 aa5.36□□□□□ -1.55
NEDD8-203ENST00000524927 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.36□□□□□ -1.55
NEDD8-203ENST00000524927 TRAV24A0A0B4J272 114 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 A0A1W2PN81 502 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 SEC14L6B5MCN3 397 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 RAB36O95755 333 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 SERPING1P05155 500 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 KLK1P06870 262 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 CD79AP11912 226 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 PAICSP22234 425 aaKnown RBP5.35□□□□□ -1.55
NEDD8-203ENST00000524927 IVDP26440 423 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 SAA4P35542 130 aa5.35□□□□□ -1.55
NEDD8-203ENST00000524927 CHRNA7P36544 502 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms