RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ACSM3Q53FZ2 586 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 ZMAT1Q5H9K5 638 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 DOK3Q7L591 496 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 NAA40Q86UY6 237 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 KBTBD8Q8NFY9 601 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 OR51E1Q8TCB6 317 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 TSEN15Q8WW01 171 aaKnown RBP11.3□□□□□ -0.6
CPNE3-205ENST00000522240 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
CPNE3-205ENST00000522240 SPSB4Q96A44 273 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 KCTD7Q96MP8 289 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 DERL3Q96Q80 235 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 OR14A2Q96R54 314 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 CENPOQ9BU64 300 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 GPR84Q9NQS5 396 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 NPAP1Q9NZP6 1156 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 ZNF319Q9P2F9 582 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 HIVEP3Q5T1R4 2406 aa11.3□□□□□ -0.6
CPNE3-205ENST00000522240 TRBV5-7A0A0A0MS05 114 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 IGHV2OR16-5A0A0B4J2B6 119 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 NKX2-6A6NCS4 301 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 SYT7O43581 403 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 ZG16O60844 167 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 SMPD2O60906 423 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 CD2P06729 351 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 OCM2P0CE71 109 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 FSTP19883 344 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 CCNOP22674 350 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 NR4A1P22736 598 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 ANOS1P23352 680 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 WNT5AP41221 380 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 NCS1P62166 190 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 LSM3P62310 102 aaKnown RBP11.29□□□□□ -0.6
CPNE3-205ENST00000522240 TFF3Q07654 80 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 ODF4Q2M2E3 257 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 GLYATL3Q5SZD4 288 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 C22orf42Q6IC83 251 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 UNQ6126/PRO20091Q6UXV3 157 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 RFPL4BQ6ZWI9 263 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 USP43Q70EL4 1123 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 CEACAM19Q7Z692 300 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 COMMD2Q86X83 199 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 PAQR4Q8N4S7 273 aaPredicted RBP11.29□□□□□ -0.6
CPNE3-205ENST00000522240 OR51A4Q8NGJ6 313 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 OR5L1Q8NGL2 311 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 AKAP1Q92667 903 aaKnown RBP eCLIP11.29□□□□□ -0.6
CPNE3-205ENST00000522240 PPP1R14AQ96A00 147 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 REEP6Q96HR9 211 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 NGBQ9NPG2 151 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 EIF3KQ9UBQ5 218 aaKnown RBP11.29□□□□□ -0.6
CPNE3-205ENST00000522240 DHDHQ9UQ10 334 aa11.29□□□□□ -0.6
CPNE3-205ENST00000522240 CREBBPQ92793 2442 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 hCG_38984A0A1B0GV85 526 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 C5orf63A6NC05 138 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 MTRF1O75570 445 aaKnown RBP11.28□□□□□ -0.6
CPNE3-205ENST00000522240 DHRS3O75911 302 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 THBDP07204 575 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 EPXP11678 715 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 CCL2P13500 99 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 ZNF35P13682 527 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 TUBG1P23258 451 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 MYL9P24844 172 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 PEX19P40855 299 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 ZNF83P51522 516 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 VBP1P61758 197 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 NAAAQ02083 359 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 MALLQ13021 153 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 INSL4Q14641 139 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 CDSNQ15517 529 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 LURAP1LQ8IV03 231 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 RDH10Q8IZV5 341 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 OR13C3Q8NGS6 347 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 OR14K1Q8NGZ2 314 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 C10orf35Q96D05 121 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 LYZL4Q96KX0 146 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 MED18Q9BUE0 208 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 N6AMT1Q9Y5N5 214 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 V9GYS6 101 aa11.28□□□□□ -0.6
CPNE3-205ENST00000522240 PCNX1Q96RV3 2341 aa11.27□□□□□ -0.6
CPNE3-205ENST00000522240 ITPR2Q14571 2701 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 TRAV1-2A0A0B4J238 106 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 M0R1B8 84 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 ATE1O95260 518 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 IL1AP01583 271 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 PTAFRP25105 342 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.61
CPNE3-205ENST00000522240 SOX2P48431 317 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 MTNR1BP49286 362 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 SPCS2Q15005 226 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 OR8B8Q15620 311 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 GFOD2Q3B7J2 385 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 HSD17B12Q53GQ0 312 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 TMEM108Q6UXF1 575 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 ZNF101Q8IZC7 436 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 PARP16Q8N5Y8 322 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 OR2AE1Q8NHA4 323 aa11.27□□□□□ -0.61
CPNE3-205ENST00000522240 NDNFQ8TB73 568 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms