RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 OR8B12Q8NGG6 310 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 OR6K6Q8NGW6 343 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 TMEM54Q969K7 222 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CAPZA3Q96KX2 299 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLC30A2Q9BRI3 323 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZNF436Q9C0F3 470 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 LRRN3Q9H3W5 708 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 RBKSQ9H477 322 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 RHOJQ9H4E5 214 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CWH43Q9H720 699 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 MAGEF1Q9HAY2 307 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 STX18Q9P2W9 335 aaKnown RBP-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 NAGKQ9UJ70 344 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 VPREB3Q9UKI3 123 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 FBXL3Q9UKT7 428 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 FRMPD4Q14CM0 1322 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 WDR90Q96KV7 1748 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CCDC7Q96M83 1385 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 LOC102724200A0A096LPH7 203 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 ISPDA4D126 451 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 HTR3EA5X5Y0 456 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 CCDC182A6NF36 153 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 OOEPA6NGQ2 149 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 DUX1O43812 170 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 EIF4E2O60573 245 aaKnown RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 B3GAT3O94766 335 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 LRATO95237 230 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 OR5H8P0DN80 308 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 HSPD1P10809 573 aaKnown RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 PORP16435 677 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZNF3P17036 446 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 DRD5P21918 477 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 P2RY2P41231 377 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 P2RX1P51575 399 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 TNFRSF17Q02223 184 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 NME3Q13232 169 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 SELPLGQ14242 412 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 C10orf120Q5SQS8 335 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 HECTD3Q5T447 861 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 PEX26Q7Z412 305 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 RPS19BP1Q86WX3 136 aaKnown RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 DOLPP1Q86YN1 238 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 NAP1L4Q99733 375 aaKnown RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLC6A7Q99884 636 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 TMEM243Q9BU79 118 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLC26A6Q9BXS9 759 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 GHITMQ9H3K2 345 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 RPAP3Q9H6T3 665 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 PROK2Q9HC23 129 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 MRPL47Q9HD33 250 aaKnown RBP-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 C8orf4Q9NR00 106 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 P2RX2Q9UBL9 471 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 TBK1Q9UHD2 729 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 RAB22AQ9UL26 194 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 VANGL2Q9ULK5 521 aa-2.27□□□□□ -2.77
RNU6-542P-201ENST00000516405 FANCMQ8IYD8 2048 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 A0A087WX48 190 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 IGHV3-21A0A0B4J1V1 117 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 LRRC30A6NM36 301 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 RNF113AO15541 343 aaKnown RBP-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 NME2P1O60361 137 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 PSIP1O75475 530 aaKnown RBP-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 NDUFA7O95182 113 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 C8orf89P0DMQ9 161 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 SPRR2EP22531 72 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 MARCKSP29966 332 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 RPL14P50914 215 aaKnown RBP-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 COG2Q14746 738 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 ELOCQ15369 112 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 KRTAP6-2Q3LI66 62 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLC36A2Q495M3 483 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 CENPPQ6IPU0 288 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 DHDDSQ86SQ9 333 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 PUSL1Q8N0Z8 303 aaKnown RBP-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLC30A7Q8NEW0 376 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 PXT1Q8NFP0 134 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 OR10AD1Q8NGE0 317 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 OR2K2Q8NGT1 345 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 RARRES2Q99969 163 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 TM6SF2Q9BZW4 377 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 ADAP2Q9NPF8 381 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 TMEM38BQ9NVV0 291 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 COPS7AQ9UBW8 275 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 PUS1Q9Y606 427 aaKnown RBP eCLIP-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 MROH5Q6ZUA9 1318 aa-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 EIF4G1Q04637 1599 aaKnown RBP-2.28□□□□□ -2.77
RNU6-542P-201ENST00000516405 PTPRSQ13332 1948 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 MEIKINA0A087WXM9 373 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 TMSB15BA0A087X1C1 80 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 SMIM26A0A096LP01 95 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 LOC107984156A0A0G2JMH3 177 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 LOC102725191A0A1B0GVB3 256 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 DHRS12A0PJE2 317 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 ZNF99A8MXY4 864 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 E9PMD0 336 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 SGK494L7N484 410 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 MGRN1O60291 552 aa-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 PGLYRP1O75594 196 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 SURF6O75683 361 aaKnown RBP-2.29□□□□□ -2.78
RNU6-542P-201ENST00000516405 GNSP15586 552 aa-2.29□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms