RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 MUC6Q6W4X9 2439 aa13.53□□□□□ -0.24
THUMPD3-210ENST00000515662 ZNF891A8MT65 544 aaPredicted RBP13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 KDM4BO94953 1096 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 ERCC1P07992 297 aaPredicted RBP13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 GABRA1P14867 456 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 CPN1P15169 458 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 PMP22Q01453 160 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 RNPS1Q15287 305 aaKnown RBP13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 DEFB109BQ30KR1 87 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 PGAP1Q75T13 922 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 ASCL5Q7RTU5 278 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 WDYHV1Q96HA8 205 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 TIMM10BQ9Y5J6 103 aa13.52□□□□□ -0.24
THUMPD3-210ENST00000515662 OR6C6A6NF89 314 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 PCBD1P61457 104 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 SNRPD2P62316 118 aaKnown RBP13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 SNTB2Q13425 540 aaKnown RBP13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 NRN1LQ496H8 165 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 DRAM2Q6UX65 266 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 CHMP1BQ7LBR1 199 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 SLC16A14Q7RTX9 510 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 OR5AS1Q8N127 324 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 AKR7LQ8NHP1 331 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 FGFBP3Q8TAT2 258 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 PHF21AQ96BD5 680 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 MRPL15Q9P015 296 aaKnown RBP13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 CELSR3Q9NYQ7 3312 aa13.52□□□□□ -0.25
THUMPD3-210ENST00000515662 CNOT1A5YKK6 2376 aaKnown RBP13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 TRAV18A0A075B6X5 111 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 ECDO95905 644 aaPredicted RBP13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 MT-ND4P03905 459 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 YES1P07947 543 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 CAPZA1P52907 286 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 PSG4Q00888 419 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 KRTAP27-1Q3LI81 207 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 PTX4Q96A99 478 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 WNT5BQ9H1J7 359 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 DPAGT1Q9H3H5 408 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 V9GYS6 101 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 OR6C65A6NJZ3 312 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 INMT-MINDY4F8WBC2 141 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 RPL36A-HNRNPH2H7BZ11 118 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 GIFP27352 417 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 STK11Q15831 433 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 SFRP5Q5T4F7 317 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 OR10K2Q6IF99 312 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 Q6ZSR3 168 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 OR52H1Q8NGJ2 320 aa13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 MYEF2Q9P2K5 600 aaKnown RBP13.51□□□□□ -0.25
THUMPD3-210ENST00000515662 PROB1E7EW31 1015 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 AKR7A2O43488 359 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 DHRS3O75911 302 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 TRAPPC2P0DI81 140 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 TRAPPC2BP0DI82 140 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 HLA-DMAP28067 261 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 ZNF93P35789 620 aaPredicted RBP13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 AP3S2P59780 193 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 ARF1P84077 181 aaKnown RBP13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 HGFACQ04756 655 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 SNAI3Q3KNW1 292 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 THOC7Q6I9Y2 204 aaKnown RBP13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 CACNG6Q9BXT2 260 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 OR10A2Q9H208 303 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 MCUBQ9NWR8 336 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 ZNF587BE7ETH6 402 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 FARS2O95363 451 aaKnown RBP13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 BPNT1O95861 308 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 MMP7P09237 267 aaPredicted RBP13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 RAB6AP20340 208 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 HTR5AP47898 357 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 BTG1P62324 171 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 RSPO4Q2I0M5 234 aaPredicted RBP13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 RNF144BQ7Z419 303 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 MCEMP1Q8IX19 187 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 CDH26Q8IXH8 852 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 APH1AQ96BI3 265 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 SGK3Q96BR1 496 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 HRASLSQ9HDD0 168 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 KCNMB2Q9Y691 235 aa13.5□□□□□ -0.25
THUMPD3-210ENST00000515662 ZNF407Q9C0G0 2248 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 IGKV1-9A0A0C4DH69 117 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 CEACAM4O75871 244 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 TCRBP04435 133 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 CCR6P51684 374 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 QRFPP83859 136 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 SPACA5Q96QH8 159 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 COPZ2Q9P299 210 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 RAB22AQ9UL26 194 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 NUBP2Q9Y5Y2 271 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 RIF1Q5UIP0 2472 aaKnown RBP13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 TRAV17A0A0B4J275 112 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 H7C417 338 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 TGM6O95932 706 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 ALDOBP05062 364 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 THBS4P35443 961 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 PMPCAQ10713 525 aa13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 NUFIP2Q7Z417 695 aaKnown RBP13.49□□□□□ -0.25
THUMPD3-210ENST00000515662 PAQR4Q8N4S7 273 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms