RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ZNF12P17014 697 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 KITLGP21583 273 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 ACHEP22303 614 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 ANOS1P23352 680 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 DDOSTP39656 456 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 TLE4Q04727 773 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 GK2Q14410 553 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 OR8B8Q15620 311 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 TRAM1Q15629 374 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 TIGD6Q17RP2 521 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 ZNF718Q3SXZ3 478 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 GLYATL3Q5SZD4 288 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 ZBTB37Q5TC79 503 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 RGS7BPQ6MZT1 257 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 DOK3Q7L591 496 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 MS4A15Q8N5U1 240 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 KBTBD8Q8NFY9 601 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 OR5AK2Q8NH90 309 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 KLF14Q8TD94 323 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 UFD1Q92890 307 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 MARVELD3Q96A59 401 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 C10orf35Q96D05 121 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 HAVCR1Q96D42 359 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 COMMD4Q9H0A8 199 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 BRD7Q9NPI1 651 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 CELSR2Q9HCU4 2923 aa10.29□□□□□ -0.76
PDLIM5-220ENST00000514830 NBPF19A0A087WUL8 3843 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 ANKRD17O75179 2603 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 A0A1B0GWJ7 208 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 C5orf63A6NC05 138 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 E7EQL1 145 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 TBX1O43435 398 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 MTRF1O75570 445 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 DHRS3O75911 302 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 ATE1O95260 518 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 CLPTM1O96005 669 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 IGHV3-13P01766 116 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 SELEP16581 610 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 CELP19835 753 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 GALP22466 123 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 PSMA1P25786 263 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 APOBEC3AP31941 199 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 THBS4P35443 961 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 FAM3AP98173 230 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 ZNF92Q03936 586 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 EFNB3Q15768 340 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 YIF1BQ5BJH7 314 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 ARMCX4Q5H9R4 360 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 PGAP1Q75T13 922 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 PHC2Q8IXK0 858 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 SLC25A40Q8TBP6 338 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 OR51E1Q8TCB6 317 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 THRSPQ92748 146 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 GHSRQ92847 366 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 PPP1R14AQ96A00 147 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 REEP6Q96HR9 211 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 LYZL4Q96KX0 146 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 DHRS9Q9BPW9 319 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 OR2J1Q9GZK6 312 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 POFUT1Q9H488 388 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 GPR84Q9NQS5 396 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 NDUFB11Q9NX14 153 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 CGGBP1Q9UFW8 167 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 FBXO9Q9UK97 447 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 HHLA2Q9UM44 414 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 ZNF281Q9Y2X9 895 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 CMAHPQ9Y471 501 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 V9GYS6 101 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 LRBAP50851 2863 aa10.28□□□□□ -0.76
PDLIM5-220ENST00000514830 TRBV5-5A0A0J9YX44 114 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 LOC107986453A0A1B0GWG9 222 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 IQCF6A8MYZ5 107 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 CCRL2O00421 344 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 HS3ST1O14792 307 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 SC5DO75845 299 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 INMTO95050 263 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 PLAUP00749 431 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 TFAP2AP05549 437 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 SSTR2P30874 369 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 ALDH3B2P48448 385 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 GP2P55259 537 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 KLF3P57682 345 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 RPS11P62280 158 aaKnown RBP eCLIP10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 PSG7Q13046 419 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 NEDD8Q15843 81 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 ADIPOQQ15848 244 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 MOGQ16653 247 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 CD200R1LQ6Q8B3 271 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 MRPL21Q7Z2W9 205 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 ZNF295-AS1Q8N0V1 137 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 ZNF676Q8N7Q3 588 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 ZNF611Q8N823 705 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 CSNK2A3Q8NEV1 391 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 OR2AE1Q8NHA4 323 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 SYNPRQ8TBG9 265 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 RGP1Q92546 391 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 FBXW5Q969U6 566 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 PDCD1LG2Q9BQ51 273 aa10.27□□□□□ -0.77
PDLIM5-220ENST00000514830 CISD1Q9NZ45 108 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms