RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 NANOGNBQ7Z5D8 188 aa2.53□□□□□ -2
CHD1-211ENST00000514344 ZNF429Q86V71 674 aa2.53□□□□□ -2
CHD1-211ENST00000514344 Q8N1Y9 231 aa2.53□□□□□ -2
CHD1-211ENST00000514344 TMEM185AQ8NFB2 350 aa2.53□□□□□ -2
CHD1-211ENST00000514344 OR4M1Q8NGD0 313 aa2.53□□□□□ -2
CHD1-211ENST00000514344 NDNFQ8TB73 568 aa2.53□□□□□ -2
CHD1-211ENST00000514344 TCP10LQ8TDR4 215 aa2.53□□□□□ -2
CHD1-211ENST00000514344 TWIST2Q8WVJ9 160 aa2.53□□□□□ -2
CHD1-211ENST00000514344 HDAC2Q92769 488 aaKnown RBP2.53□□□□□ -2
CHD1-211ENST00000514344 EME1Q96AY2 570 aa2.53□□□□□ -2
CHD1-211ENST00000514344 SLCO4A1Q96BD0 722 aa2.53□□□□□ -2
CHD1-211ENST00000514344 MALSU1Q96EH3 234 aa2.53□□□□□ -2
CHD1-211ENST00000514344 OR5B12Q96R08 314 aa2.53□□□□□ -2
CHD1-211ENST00000514344 TUBA4BQ9H853 241 aa2.53□□□□□ -2
CHD1-211ENST00000514344 SCRT2Q9NQ03 307 aa2.53□□□□□ -2
CHD1-211ENST00000514344 C19orf12Q9NSK7 152 aa2.53□□□□□ -2
CHD1-211ENST00000514344 C19orf73Q9NVV2 129 aa2.53□□□□□ -2
CHD1-211ENST00000514344 SLC13A4Q9UKG4 626 aa2.53□□□□□ -2
CHD1-211ENST00000514344 SNX12Q9UMY4 172 aa2.53□□□□□ -2
CHD1-211ENST00000514344 PRSS51A0A1B0GVH4 220 aa2.53□□□□□ -2
CHD1-211ENST00000514344 PRSS29PA6NIE9 313 aa2.53□□□□□ -2
CHD1-211ENST00000514344 C12orf71A8MTZ7 269 aa2.53□□□□□ -2
CHD1-211ENST00000514344 SERPINE3A8MV23 424 aa2.53□□□□□ -2
CHD1-211ENST00000514344 G3V2L1 256 aa2.53□□□□□ -2
CHD1-211ENST00000514344 H3BUI4 141 aa2.53□□□□□ -2
CHD1-211ENST00000514344 RER1O15258 196 aa2.53□□□□□ -2
CHD1-211ENST00000514344 PSPNO60542 156 aa2.53□□□□□ -2
CHD1-211ENST00000514344 MT-ATP6P00846 226 aa2.53□□□□□ -2
CHD1-211ENST00000514344 HIST1H2ABP04908 130 aa2.53□□□□□ -2
CHD1-211ENST00000514344 CHRNGP07510 517 aa2.53□□□□□ -2
CHD1-211ENST00000514344 PIPP12273 146 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 MSR1P21757 451 aa2.53□□□□□ -2
CHD1-211ENST00000514344 BGNP21810 368 aa2.53□□□□□ -2
CHD1-211ENST00000514344 GABRA2P47869 451 aa2.53□□□□□ -2
CHD1-211ENST00000514344 CDH12P55289 794 aa2.53□□□□□ -2
CHD1-211ENST00000514344 RPL18Q07020 188 aaKnown RBP2.53□□□□□ -2
CHD1-211ENST00000514344 C6orf136Q5SQH8 315 aa2.53□□□□□ -2
CHD1-211ENST00000514344 LGALS9CQ6DKI2 356 aa2.53□□□□□ -2
CHD1-211ENST00000514344 ZNF770Q6IQ21 691 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 C8orf74Q6P047 294 aa2.53□□□□□ -2
CHD1-211ENST00000514344 ZNF621Q6ZSS3 439 aa2.53□□□□□ -2
CHD1-211ENST00000514344 PGAP1Q75T13 922 aa2.53□□□□□ -2
CHD1-211ENST00000514344 HIST3H2AQ7L7L0 130 aa2.53□□□□□ -2
CHD1-211ENST00000514344 CATSPERDQ86XM0 798 aa2.53□□□□□ -2
CHD1-211ENST00000514344 EGFL6Q8IUX8 553 aa2.53□□□□□ -2
CHD1-211ENST00000514344 C10orf107Q8IVU9 208 aa2.53□□□□□ -2
CHD1-211ENST00000514344 MICU2Q8IYU8 434 aa2.53□□□□□ -2
CHD1-211ENST00000514344 LSMEM1Q8N8F7 131 aa2.53□□□□□ -2
CHD1-211ENST00000514344 SLC38A5Q8WUX1 472 aa2.53□□□□□ -2
CHD1-211ENST00000514344 ASB10Q8WXI3 467 aa2.53□□□□□ -2
CHD1-211ENST00000514344 IFT81Q8WYA0 676 aa2.53□□□□□ -2
CHD1-211ENST00000514344 HIST1H2ACQ93077 130 aa2.53□□□□□ -2
CHD1-211ENST00000514344 APOBEC3DQ96AK3 386 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 FOXRED1Q96CU9 486 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 PANX1Q96RD7 426 aa2.53□□□□□ -2
CHD1-211ENST00000514344 P2RX2Q9UBL9 471 aa2.53□□□□□ -2
CHD1-211ENST00000514344 RNF213Q63HN8 5207 aa2.53□□□□□ -2
CHD1-211ENST00000514344 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2.01
CHD1-211ENST00000514344 CCDC154A6NI56 674 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 C12orf77C9JDV5 145 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 H7C1C5 153 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 IGF1P05019 195 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 PGA5P0DJD9 388 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 MYL2P10916 166 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 AZGP1P25311 298 aaKnown RBP2.52□□□□□ -2.01
CHD1-211ENST00000514344 AQP1P29972 269 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 CDKN2CP42773 168 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 PAFAH1B1P43034 410 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 TGM4P49221 684 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 CAPZA1P52907 286 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 MVDP53602 400 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 LCN6P62502 163 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 CBX1P83916 185 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 SCRN3Q0VDG4 424 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 SEC23BQ15437 767 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 SNAPC1Q16533 368 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 ZNF74Q16587 644 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 ARMC4Q5T2S8 1044 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 FAM53AQ6NSI3 398 aaPredicted RBP2.52□□□□□ -2.01
CHD1-211ENST00000514344 NAA40Q86UY6 237 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 SGPP2Q8IWX5 399 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 GOLGA6L1Q8N7Z2 621 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 CHPT1Q8WUD6 406 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 MAL2Q969L2 176 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 TMEM19Q96HH6 336 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 PPP3R2Q96LZ3 170 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 PITX2Q99697 317 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 WFDC6Q9BQY6 131 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 C12orf10Q9HB07 376 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 DYNC1H1Q14204 4646 aaKnown RBP2.52□□□□□ -2.01
CHD1-211ENST00000514344 A0A0B4J2E0 115 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 A0A1B0GWJ7 208 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 A0A1B0GX12 115 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 F5H5K5 113 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 BHLHE40O14503 412 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 CDIPTO14735 213 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 AKR7A2O43488 359 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 TPST2O60704 377 aa2.52□□□□□ -2.01
CHD1-211ENST00000514344 COX5BP10606 129 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms