RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 OR5M11Q96RB7 305 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 VRK1Q99986 396 aaPredicted RBP9.68□□□□□ -0.86
HTT-213ENST00000513806 JAM3Q9BX67 310 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 OR10A2Q9H208 303 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 DUSP21Q9H596 190 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 NIPAL2Q9H841 368 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 GPR84Q9NQS5 396 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 INPP5EQ9NRR6 644 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 FRRS1LQ9P0K9 344 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 ST6GALNAC2Q9UJ37 374 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 TPRKBQ9Y3C4 175 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 LRRC42Q9Y546 428 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 DYSFO75923 2080 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 AKAP9Q99996 3911 aa9.68□□□□□ -0.86
HTT-213ENST00000513806 TANC2Q9HCD6 1990 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 hCG_38984A0A1B0GV85 526 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 GGT3PA6NGU5 568 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 B9A039 149 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 SPRY3O43610 288 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 RGS10O43665 173 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 IGHV3-13P01766 116 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 RAF1P04049 648 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 HLA-DPB1P04440 258 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 ACKR3P25106 362 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 GSK3AP49840 483 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 ACTA2P62736 377 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 ACTG2P63267 376 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 IRF3Q14653 427 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 EFNB3Q15768 340 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 TSTQ16762 297 aaKnown RBP9.67□□□□□ -0.86
HTT-213ENST00000513806 NKPD1Q17RQ9 610 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 FBXW12Q6X9E4 464 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 PGAP1Q75T13 922 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 ELMOD2Q8IZ81 293 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 NANOGP1Q8N7R0 232 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 ZNF485Q8NCK3 441 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 MYDGFQ969H8 173 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 HAVCR1Q96D42 359 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 PERPQ96FX8 193 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 SORCS2Q96PQ0 1159 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
HTT-213ENST00000513806 DYNLRB1Q9NP97 96 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 CHCHD3Q9NX63 227 aaKnown RBP9.67□□□□□ -0.86
HTT-213ENST00000513806 NUFIP1Q9UHK0 495 aaKnown RBP9.67□□□□□ -0.86
HTT-213ENST00000513806 CAB39Q9Y376 341 aaPredicted RBP9.67□□□□□ -0.86
HTT-213ENST00000513806 SNX5Q9Y5X3 404 aa9.67□□□□□ -0.86
HTT-213ENST00000513806 A0A1B0GTI1 187 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 CD300LBA8K4G0 201 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 LYNX1G3V0Z9 82 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 MYL12BO14950 172 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 XRCC2O43543 280 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 NCR1O76036 304 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 IGLV3-1P01715 115 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 APOC1P02654 83 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 MT-ND5P03915 603 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 TACSTD2P09758 323 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 LYNX1P0DP58 116 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 RAC2P15153 192 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 SELEP16581 610 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 KITLGP21583 273 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 DCTDP32321 178 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 MMP15P51511 669 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 MMP16P51512 607 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 SNRPD2P62316 118 aaKnown RBP9.66□□□□□ -0.86
HTT-213ENST00000513806 CSNK2BP67870 215 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 ALKBH1Q13686 389 aaKnown RBP9.66□□□□□ -0.86
HTT-213ENST00000513806 CDH24Q86UP0 819 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 SYS1Q8N2H4 156 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 OR10AD1Q8NGE0 317 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 OR52H1Q8NGJ2 320 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 OR51A4Q8NGJ6 313 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 OR13C5Q8NGS8 318 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 SPSB4Q96A44 273 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 PDCD1LG2Q9BQ51 273 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 FAIMQ9NVQ4 179 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 TREM2Q9NZC2 230 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 LSM2Q9Y333 95 aaKnown RBP9.66□□□□□ -0.86
HTT-213ENST00000513806 VPS13CQ709C8 3753 aa9.66□□□□□ -0.86
HTT-213ENST00000513806 PRRC2AP48634 2157 aaKnown RBP9.65□□□□□ -0.86
HTT-213ENST00000513806 OR4C45A6NMZ5 311 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 VSTM5A8MXK1 200 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 IQCF6A8MYZ5 107 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 M0R233 179 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 OVOL3O00110 214 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 MLNRO43193 412 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 IGHV1-46P01743 117 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 CA6P23280 308 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 DNASE1P24855 282 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 GBX2P52951 348 aaPredicted RBP9.65□□□□□ -0.86
HTT-213ENST00000513806 WNT4P56705 351 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 SLC3A1Q07837 685 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 MED22Q15528 200 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 UNQ6126/PRO20091Q6UXV3 157 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 TMPRSS11AQ6ZMR5 421 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 KCTD20Q7Z5Y7 419 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 TGIF2LYQ8IUE0 185 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 OR2Z1Q8NG97 314 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 OR52N1Q8NH53 320 aa9.65□□□□□ -0.86
HTT-213ENST00000513806 RGP1Q92546 391 aaPredicted RBP9.65□□□□□ -0.86
HTT-213ENST00000513806 MRPL48Q96GC5 212 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms