RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 GK2Q14410 553 aaPredicted RBP10.78□□□□□ -0.68
PDPN-210ENST00000513143 TRAM1Q15629 374 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 YIF1BQ5BJH7 314 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 ADAM5Q6NVV9 412 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 FBXW12Q6X9E4 464 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 MS4A15Q8N5U1 240 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 CCDC54Q8NEL0 328 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 SLC25A40Q8TBP6 338 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 RGP1Q92546 391 aaPredicted RBP10.78□□□□□ -0.68
PDPN-210ENST00000513143 AKAP1Q92667 903 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDPN-210ENST00000513143 ITFG2Q969R8 447 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 YIPF6Q96EC8 236 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 PIK3IP1Q96FE7 263 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 MARS2Q96GW9 593 aaKnown RBP10.78□□□□□ -0.68
PDPN-210ENST00000513143 OR2J1Q9GZK6 312 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 OPA3Q9H6K4 179 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 PTTG3PQ9NZH4 202 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 HHLA2Q9UM44 414 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 RNF115Q9Y4L5 304 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 ROS1P08922 2347 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 TRBV5-5A0A0J9YX44 114 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 hCG_38984A0A1B0GV85 526 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 A0A1B0GVI7 797 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 LOC107986453A0A1B0GWG9 222 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 LOC390937A0A1W2PQ73 354 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 SYT7O43581 403 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 RAC2P15153 192 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 CD36P16671 472 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 PSMA1P25786 263 aaKnown RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 RPS23P62266 143 aaKnown RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 RPS25P62851 125 aaKnown RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 FAM3AP98173 230 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 HLXQ14774 488 aaPredicted RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 GFOD2Q3B7J2 385 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 ZNF718Q3SXZ3 478 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 SPATA46Q5T0L3 261 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 MBNL2Q5VZF2 373 aaKnown RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 SP5Q6BEB4 398 aaPredicted RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 RGS7BPQ6MZT1 257 aaPredicted RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 CD200R1LQ6Q8B3 271 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 PGAP1Q75T13 922 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 DOK3Q7L591 496 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 MRPL21Q7Z2W9 205 aaKnown RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 GPR141Q7Z602 305 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 COMMD2Q86X83 199 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 KBTBD8Q8NFY9 601 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 OR10AC1Q8NH08 325 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 KLF14Q8TD94 323 aaPredicted RBP10.77□□□□□ -0.69
PDPN-210ENST00000513143 GPR148Q8TDV2 347 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 TMEM171Q8WVE6 324 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 TMEM203Q969S6 136 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 HAVCR1Q96D42 359 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 SOX7Q9BT81 388 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 TMED9Q9BVK6 235 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 ZNF442Q9H7R0 627 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 CA10Q9NS85 328 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 ATP23Q9Y6H3 246 aa10.77□□□□□ -0.69
PDPN-210ENST00000513143 DOPEY2Q9Y3R5 2298 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 USP9YO00507 2555 aaPredicted RBP10.76□□□□□ -0.69
PDPN-210ENST00000513143 FAM221AA4D161 298 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 A6NNC1 897 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 MTRF1O75570 445 aaKnown RBP10.76□□□□□ -0.69
PDPN-210ENST00000513143 SC5DO75845 299 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 DHRS3O75911 302 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 PLAUP00749 431 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 SERPINA3P01011 423 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 ZNF250P15622 560 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 ZNF12P17014 697 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 GALP22466 123 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 TTKP33981 857 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 THBS4P35443 961 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 GSK3AP49840 483 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 TNK1Q13470 666 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 OR8B8Q15620 311 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 MSMPQ1L6U9 139 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 UNQ9370/PRO34162Q6UXP9 181 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 OR51A4Q8NGJ6 313 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 OR13C5Q8NGS8 318 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 OR14K1Q8NGZ2 314 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 LILRB1Q8NHL6 650 aaPredicted RBP10.76□□□□□ -0.69
PDPN-210ENST00000513143 CMBLQ96DG6 245 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 FAM71F1Q96KD3 344 aaPredicted RBP10.76□□□□□ -0.69
PDPN-210ENST00000513143 PSMG3-AS1Q96PY0 264 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 POU2F3Q9UKI9 436 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 V9GYS6 101 aa10.76□□□□□ -0.69
PDPN-210ENST00000513143 DHRS7CA6NNS2 312 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 E7EQL1 145 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 H3BSH0 61 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 HLA-DPB1P04440 258 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 ACKR3P25106 362 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 MPV17P39210 176 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 CRYBB2P43320 205 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 MAGEB1P43366 347 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 MAP2K3P46734 347 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 FABP5Q01469 135 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 PSG7Q13046 419 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 Q499Y3 187 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 ZNF672Q499Z4 452 aaPredicted RBP10.75□□□□□ -0.69
PDPN-210ENST00000513143 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 TMEM255AQ5JRV8 349 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms