RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 LRRC74AQ0VAA2 488 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 NFYCQ13952 458 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 GK2Q14410 553 aaPredicted RBP5.7□□□□□ -1.5
VCAN-207ENST00000507162 SRSF7Q16629 238 aaKnown RBP eCLIP5.7□□□□□ -1.5
VCAN-207ENST00000507162 PCK2Q16822 640 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 DEFB136Q30KP8 78 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 CCDC153Q494R4 210 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 ARMC4Q5T2S8 1044 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 LCNL1Q6ZST4 164 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 ZNF572Q7Z3I7 529 aaPredicted RBP5.7□□□□□ -1.5
VCAN-207ENST00000507162 C11orf42Q8N5U0 333 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 MOSPD2Q8NHP6 518 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 EPS8L3Q8TE67 593 aaKnown RBP5.7□□□□□ -1.5
VCAN-207ENST00000507162 MALSU1Q96EH3 234 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 MED30Q96HR3 178 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 ITCHQ96J02 903 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 OR52E6Q96RD3 313 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 WFDC6Q9BQY6 131 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 SPATA25Q9BR10 227 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 FUT8Q9BYC5 575 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 POLE4Q9NR33 117 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 ZFP57Q9NU63 452 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 ADA2Q9NZK5 511 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 ZNF229Q9UJW7 825 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 SLC13A4Q9UKG4 626 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 NOP16Q9Y3C1 178 aaKnown RBP5.7□□□□□ -1.5
VCAN-207ENST00000507162 LYVE1Q9Y5Y7 322 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 A0A087WUV0 522 aaPredicted RBP5.69□□□□□ -1.5
VCAN-207ENST00000507162 A0A1W2PPM1 405 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 OR6C6A6NF89 314 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 FAM90A8PA6NJQ4 464 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 J3QW42 95 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 TRIM13O60858 407 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 FUT1P19526 365 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 CD24P25063 80 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 AZGP1P25311 298 aaKnown RBP5.69□□□□□ -1.5
VCAN-207ENST00000507162 SLC6A1P30531 599 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 GRK5P34947 590 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 GABRA2P47869 451 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 DYNC1I2Q13409 638 aaKnown RBP5.69□□□□□ -1.5
VCAN-207ENST00000507162 DGUOKQ16854 277 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 CCDC92Q53HC0 331 aaPredicted RBP5.69□□□□□ -1.5
VCAN-207ENST00000507162 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 LINC00114Q6XXX2 140 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 ZNF782Q6ZMW2 699 aaPredicted RBP5.69□□□□□ -1.5
VCAN-207ENST00000507162 PGAP1Q75T13 922 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 LNX2Q8N448 690 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 ACMSDQ8TDX5 336 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 STMN2Q93045 179 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 MAL2Q969L2 176 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 TESCQ96BS2 214 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 FOXRED1Q96CU9 486 aaPredicted RBP5.69□□□□□ -1.5
VCAN-207ENST00000507162 AKR1E2Q96JD6 320 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 MCHR1Q99705 422 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 ALG12Q9BV10 488 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 SLC22A4Q9H015 551 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 PPP1R3EQ9H7J1 279 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 VSX1Q9NZR4 365 aaPredicted RBP5.69□□□□□ -1.5
VCAN-207ENST00000507162 UBR4Q5T4S7 5183 aa5.69□□□□□ -1.5
VCAN-207ENST00000507162 IGLV1-36A0A0B4J1U3 117 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.68□□□□□ -1.5
VCAN-207ENST00000507162 GGT3PA6NGU5 568 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 CPSF4LA6NMK7 179 aaKnown RBP5.68□□□□□ -1.5
VCAN-207ENST00000507162 CD300LBA8K4G0 201 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 E9PBE3 544 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 H3BSH0 61 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 RFXANKO14593 260 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 RER1O15258 196 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 ANP32DO95626 131 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 LCATP04180 440 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 IGHV4-30-4P0DP06 118 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 GP9P14770 177 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 SPNP16150 400 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 PTMSP20962 102 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 GCAP28676 217 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 OR3A4PP47883 348 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 CCT5P48643 541 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 CAPZA1P52907 286 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 MVDP53602 400 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 CLNS1AP54105 237 aaKnown RBP5.68□□□□□ -1.5
VCAN-207ENST00000507162 MZT1Q08AG7 82 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 MALLQ13021 153 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 MPP2Q14168 576 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 SEC23BQ15437 767 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 ATPAF1Q5TC12 328 aaPredicted RBP5.68□□□□□ -1.5
VCAN-207ENST00000507162 PLBD1Q6P4A8 553 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 DHRS4L2Q6PKH6 230 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 FOXL2NBQ6ZUU3 175 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 MRPL21Q7Z2W9 205 aaKnown RBP5.68□□□□□ -1.5
VCAN-207ENST00000507162 DPY19L4Q7Z388 723 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 GOLGA6L1Q8N7Z2 621 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 SPATA4Q8NEY3 305 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 NOL4LQ96MY1 436 aaPredicted RBP5.68□□□□□ -1.5
VCAN-207ENST00000507162 GAFA1Q96PS6 74 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 ATF6BQ99941 703 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 WACQ9BTA9 647 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 ST6GALNAC5Q9BVH7 336 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 TXNIPQ9H3M7 391 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 AKTIPQ9H8T0 292 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 TPT1P8Q9HAU6 139 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms