RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 FBXL17Q9UF56 701 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 FREM3P0C091 2139 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 A0A1W2PPE2 198 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 A0A1W2PQU0 124 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 C5AR1P21730 350 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 RPL12P30050 165 aaKnown RBP15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 CDX1P47902 265 aaPredicted RBP15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 ZP2Q05996 745 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 TMEM240Q5SV17 173 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 RTL10Q7L3V2 364 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 SLC22A24Q8N4F4 322 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 FAM160A2Q8N612 972 aaPredicted RBP15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 SGK3Q96BR1 496 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 UBQLN4Q9NRR5 601 aa15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 MRPS23Q9Y3D9 190 aaKnown RBP15.21■□□□□ 0.02
SQSTM1-211ENST00000506690 TMEM14DPA8MWL7 114 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 IFNA2P01563 188 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 WASP42768 502 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 P2RY4P51582 365 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 Q3ZCU0 254 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 MED25Q71SY5 747 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 Q7L0L9 218 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 LHFPL1Q86WI0 220 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 CCL4L1Q8NHW4 92 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 SCGB3A2Q96PL1 93 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 NICN1Q9BSH3 213 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 CNTNAP3Q9BZ76 1288 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 CHST5Q9GZS9 411 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 OR10A5Q9H207 317 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 AMDHD2Q9Y303 409 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 MEMO1Q9Y316 297 aa15.2■□□□□ 0.02
SQSTM1-211ENST00000506690 LOC101059948A0A1B0GTJ6 334 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 UMAD1C9J7I0 102 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 P2RY10O00398 339 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 ST8SIA5O15466 376 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 YIF1AO95070 293 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 ITGA3P26006 1051 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 CLDN6P56747 220 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 RAB1AP62820 205 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 C1QL3Q5VWW1 255 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 OPN5Q6U736 354 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 HEPN1Q6WQI6 88 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 SPRED2Q7Z698 418 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 ZNF565Q8N9K5 539 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 PNLDC1Q8NA58 520 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 UBAC2Q8NBM4 344 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 SPPL3Q8TCT6 385 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 GTF3AQ92664 365 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 FGGYQ96C11 551 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 PTGES2Q9H7Z7 377 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 FAM212BQ9NTI7 297 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 K7EPK0 472 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 GPR37O15354 613 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 ADH1BP00325 375 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 HPGDP15428 266 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 FCGR2CP31995 323 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 IGLV3-21P80748 117 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 FUT7Q11130 342 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 BIKQ13323 160 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 PDGFRLQ15198 375 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 HIST2H3AQ71DI3 136 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 FAM71E2Q8N5Q1 922 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 OR1E3Q8WZA6 343 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 ELSPBP1Q96BH3 223 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 DNAJA3Q96EY1 480 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 PARP12Q9H0J9 701 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 CLDN16Q9Y5I7 305 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 MYO7AQ13402 2215 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 CPAMD8Q8IZJ3 1885 aa15.19■□□□□ 0.02
SQSTM1-211ENST00000506690 A0A0A6YYD4 124 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 TMEM269A0A1B0GVZ9 245 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 HCRTR1O43613 425 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 PRKNO60260 465 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 MPZL1O95297 269 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 CHRM2P08172 466 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 GSTP1P09211 210 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 SELLP14151 372 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 TMEM33P57088 247 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 PLAC9Q5JTB6 97 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 AADACL3Q5VUY0 350 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 ZNF615Q8N8J6 731 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 LPAR5Q9H1C0 372 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 ARV1Q9H2C2 271 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 UFSP2Q9NUQ7 469 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 SLC5A6Q9Y289 635 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 HDGFL3Q9Y3E1 203 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 A6NCN8 305 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 FIGNL2A6NMB9 653 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 C2orf74A8MZ97 194 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 DANCRP0C864 163 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 EMP2P54851 167 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 FOXRED2Q8IWF2 684 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 ZNF383Q8NA42 475 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 RHBDD1Q8TEB9 315 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 DGAT2Q96PD7 388 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 EIF5A2Q9GZV4 153 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 TXNIPQ9H3M7 391 aa15.18■□□□□ 0.02
SQSTM1-211ENST00000506690 TRAV36DV7A0A075B6V5 113 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 NME2P1O60361 137 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms