RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GP2P55259 537 aaKnown RBP9.96□□□□□ -0.82
LSM6-204ENST00000504181 RPL27P61353 136 aaKnown RBP9.96□□□□□ -0.82
LSM6-204ENST00000504181 PGAP1Q75T13 922 aa9.96□□□□□ -0.82
LSM6-204ENST00000504181 TSPYL5Q86VY4 417 aaPredicted RBP9.96□□□□□ -0.82
LSM6-204ENST00000504181 FAM185AQ8N0U4 392 aa9.96□□□□□ -0.82
LSM6-204ENST00000504181 KLHL30-AS1Q8NEE0 82 aa9.96□□□□□ -0.82
LSM6-204ENST00000504181 ZNF426Q9BUY5 554 aa9.96□□□□□ -0.82
LSM6-204ENST00000504181 SLC22A4Q9H015 551 aa9.96□□□□□ -0.82
LSM6-204ENST00000504181 AIG1Q9NVV5 245 aa9.96□□□□□ -0.82
LSM6-204ENST00000504181 ZNF391Q9UJN7 358 aa9.96□□□□□ -0.82
LSM6-204ENST00000504181 SMIM23A6NLE4 172 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 SNRNP70P08621 437 aaKnown RBP9.95□□□□□ -0.82
LSM6-204ENST00000504181 BMP2P12643 396 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 AQP1P29972 269 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 GMFBP60983 142 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 SELPLGQ14242 412 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 SSX2Q16385 188 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 DGUOKQ16854 277 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 ALG10Q5BKT4 473 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 STUMQ69YW2 141 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 REEP3Q6NUK4 255 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 OR2W3Q7Z3T1 314 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 RBM45Q8IUH3 476 aaKnown RBP9.95□□□□□ -0.82
LSM6-204ENST00000504181 ARMC8Q8IUR7 673 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 ZNF781Q8N8C0 355 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 SMYD1Q8NB12 490 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 OR6T1Q8NGN1 323 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 ZBTB18Q99592 522 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 HEXA-AS1Q9H8Q6 139 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 SNTG1Q9NSN8 517 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.95□□□□□ -0.82
LSM6-204ENST00000504181 ATPIF1Q9UII2 106 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 SCOCQ9UIL1 159 aa9.95□□□□□ -0.82
LSM6-204ENST00000504181 TRAPPC13A5PLN9 417 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 FAM90A8PA6NJQ4 464 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 SEC14L6B5MCN3 397 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 CLIC1O00299 241 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 SLC25A17O43808 307 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 MT-ND1P03886 318 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 TSPAN19P0C672 248 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 CDK6Q00534 326 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 MALLQ13021 153 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 FADDQ13158 208 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 ABCA11PQ4W5N1 156 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 C6orf10Q5SRN2 563 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 TRMT10CQ7L0Y3 403 aaKnown RBP9.94□□□□□ -0.82
LSM6-204ENST00000504181 MRPL21Q7Z2W9 205 aaKnown RBP9.94□□□□□ -0.82
LSM6-204ENST00000504181 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 SGTBQ96EQ0 304 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 MPP4Q96JB8 637 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 GAFA1Q96PS6 74 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 PRSS27Q9BQR3 290 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
LSM6-204ENST00000504181 VSX1Q9NZR4 365 aaPredicted RBP9.94□□□□□ -0.82
LSM6-204ENST00000504181 SH2D7A6NKC9 451 aaPredicted RBP9.93□□□□□ -0.82
LSM6-204ENST00000504181 CD300LBA8K4G0 201 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 ITM2AO43736 263 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 CTLA4P16410 223 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 ERVFRD-1P60508 538 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 CTXN1P60606 82 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 CSNK2BP67870 215 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 GCNT6Q5T4J0 391 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 ATPAF1Q5TC12 328 aaPredicted RBP9.93□□□□□ -0.82
LSM6-204ENST00000504181 ZNF572Q7Z3I7 529 aaPredicted RBP9.93□□□□□ -0.82
LSM6-204ENST00000504181 NAA40Q86UY6 237 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 C11orf53Q8IXP5 236 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 LNX2Q8N448 690 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 OR4D11Q8NGI4 311 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 LINC00476Q8WZB0 136 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 FOXRED1Q96CU9 486 aaPredicted RBP9.93□□□□□ -0.82
LSM6-204ENST00000504181 RAX2Q96IS3 184 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 ITCHQ96J02 903 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 COQ7Q99807 217 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 EVA1AQ9H8M9 152 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 RNPEPL1Q9HAU8 725 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 GRPEL1Q9HAV7 217 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 C14orf119Q9NWQ9 140 aa9.93□□□□□ -0.82
LSM6-204ENST00000504181 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.92□□□□□ -0.82
LSM6-204ENST00000504181 PSMB11A5LHX3 300 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 POLR3GO15318 223 aaPredicted RBP9.92□□□□□ -0.82
LSM6-204ENST00000504181 LCATP04180 440 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 ARG1P05089 322 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 IL6P05231 212 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 GRK5P34947 590 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 CAV3P56539 151 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 SCARB2Q14108 478 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 RSPO1Q2MKA7 263 aaPredicted RBP9.92□□□□□ -0.82
LSM6-204ENST00000504181 LDLRAD2Q5SZI1 272 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 WDR82Q6UXN9 313 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 ZNF782Q6ZMW2 699 aaPredicted RBP9.92□□□□□ -0.82
LSM6-204ENST00000504181 ZNF788Q6ZQV5 615 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 WDR86Q86TI4 376 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 ZNF329Q86UD4 541 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 OSR2Q8N2R0 312 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 OR5M8Q8NGP6 311 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 TMEM255BQ8WV15 326 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 C12orf43Q96C57 262 aaKnown RBP9.92□□□□□ -0.82
LSM6-204ENST00000504181 MED30Q96HR3 178 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 APOPT1Q96IL0 206 aa9.92□□□□□ -0.82
LSM6-204ENST00000504181 HDHD2Q9H0R4 259 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms