RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RPS25P62851 125 aaKnown RBP17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 YIF1BQ5BJH7 314 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 VHLLQ6RSH7 139 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 PGAP1Q75T13 922 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 MS4A15Q8N5U1 240 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 KBTBD8Q8NFY9 601 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 AKAP1Q92667 903 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 FAM71F1Q96KD3 344 aaPredicted RBP17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 A0A1B0GVI7 797 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 ACHEP22303 614 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 TUBG1P23258 451 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 GABRA5P31644 462 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 TGFBR2P37173 567 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 FAM3AP98173 230 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 BLMHQ13867 455 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 MRPL21Q7Z2W9 205 aaKnown RBP17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 PLPP7Q8NBV4 271 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 KLF14Q8TD94 323 aaPredicted RBP17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 TMEM204Q9BSN7 226 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 TUBG2Q9NRH3 451 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 CA10Q9NS85 328 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 KCNN3Q9UGI6 736 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 ICE1Q9Y2F5 2266 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 USP9YO00507 2555 aaPredicted RBP17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 CCL1P22362 96 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 CFL1P23528 166 aaKnown RBP17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 THBS4P35443 961 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 MAGEB1P43366 347 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 FABP6P51161 128 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 RGS7BPQ6MZT1 257 aaPredicted RBP17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 FBXW12Q6X9E4 464 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 DOK3Q7L591 496 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 GPR141Q7Z602 305 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 GPR148Q8TDV2 347 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 TMEM171Q8WVE6 324 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 YIPF6Q96EC8 236 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 ABCA4P78363 2273 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 ROS1P08922 2347 aa17.53■□□□□ 0.4
CDC42SE2-206ENST00000503291 PLCE1Q9P212 2302 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 hCG_38984A0A1B0GV85 526 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 PSMA1P25786 263 aaKnown RBP17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 INSL4Q14641 139 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 ZNF718Q3SXZ3 478 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 SATL1Q86VE3 508 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 NEUROG1Q92886 237 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 CMBLQ96DG6 245 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 FZR1Q9UM11 496 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 PKDREJQ9NTG1 2253 aa17.52■□□□□ 0.4
CDC42SE2-206ENST00000503291 A6NNC1 897 aa17.52■□□□□ 0.39
CDC42SE2-206ENST00000503291 MTRF1O75570 445 aaKnown RBP17.52■□□□□ 0.39
CDC42SE2-206ENST00000503291 DHRS3O75911 302 aa17.52■□□□□ 0.39
CDC42SE2-206ENST00000503291 GSK3AP49840 483 aa17.52■□□□□ 0.39
CDC42SE2-206ENST00000503291 RPS23P62266 143 aaKnown RBP17.52■□□□□ 0.39
CDC42SE2-206ENST00000503291 MSMPQ1L6U9 139 aa17.52■□□□□ 0.39
CDC42SE2-206ENST00000503291 OPA3Q9H6K4 179 aa17.52■□□□□ 0.39
CDC42SE2-206ENST00000503291 OCM2P0CE71 109 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 RAC2P15153 192 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 MPV17P39210 176 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 FABP5Q01469 135 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 PSG7Q13046 419 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 TNK1Q13470 666 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 TRAM1Q15629 374 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 Q6ZSR3 168 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 OR14K1Q8NGZ2 314 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 LILRB1Q8NHL6 650 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 HAVCR1Q96D42 359 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 PSMG3-AS1Q96PY0 264 aa17.51■□□□□ 0.39
CDC42SE2-206ENST00000503291 LOC390937A0A1W2PQ73 354 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 E7EQL1 145 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 LMX1BO60663 402 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 HLA-DPB1P04440 258 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 GCH1P30793 250 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 SOX2P48431 317 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 Q499Y3 187 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 ACSM3Q53FZ2 586 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 MBNL2Q5VZF2 373 aaKnown RBP17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 OR13C3Q8NGS6 347 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 TSEN15Q8WW01 171 aaKnown RBP17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 OR14A2Q96R54 314 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 FUNDC2Q9BWH2 189 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 ZNF442Q9H7R0 627 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 DUSP13Q9UII6 198 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 TRBV5-5A0A0J9YX44 114 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 GGT3PA6NGU5 568 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 SC5DO75845 299 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 ZNF250P15622 560 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 ZNF12P17014 697 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 GADD45AP24522 165 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 ACKR3P25106 362 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 TTKP33981 857 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 CRYBB2P43320 205 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 MAP2K3P46734 347 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 OR8B8Q15620 311 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 OR2T2Q6IF00 324 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 CD200R1LQ6Q8B3 271 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 TMEM91Q6ZNR0 172 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 SYNPRQ8TBG9 265 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 OR51E2Q9H255 320 aa17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 ZNF275Q9NSD4 429 aaPredicted RBP17.5■□□□□ 0.39
CDC42SE2-206ENST00000503291 CISD1Q9NZ45 108 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms