RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 FOXJ3Q9UPW0 622 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 NUP210LQ5VU65 1888 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 ASCC3Q8N3C0 2202 aaKnown RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 MEIKINA0A087WXM9 373 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 RAD1O60671 282 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 KHDRBS3O75525 346 aaKnown RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 NSA2O95478 260 aaKnown RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 RAF1P04049 648 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 CD1CP29017 333 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 TACR3P29371 465 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 PSMD4P55036 377 aaKnown RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 UBE2G2P60604 165 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 RNPS1Q15287 305 aaKnown RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 TMEM69Q5SWH9 247 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 DCAF12L2Q5VW00 463 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 NKAIN2Q5VXU1 208 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 KIAA0895LQ68EN5 471 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 ZNF782Q6ZMW2 699 aaPredicted RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 TMPRSS12Q86WS5 348 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 FAM109AQ8N4B1 249 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 OR5AK2Q8NH90 309 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 C2CD4CQ8TF44 421 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 TAAR8Q969N4 342 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 GPX7Q96SL4 187 aaPredicted RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 STRADBQ9C0K7 418 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 SYT4Q9H2B2 425 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 RIMS4Q9H426 269 aaPredicted RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 APMAPQ9HDC9 416 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 VSX1Q9NZR4 365 aaPredicted RBP7.93□□□□□ -1.14
FN1-227ENST00000498719 FKBP7Q9Y680 259 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 MED12Q93074 2177 aa7.93□□□□□ -1.14
FN1-227ENST00000498719 C11orf98E9PRG8 122 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 GABARAPH6UMI1 98 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 SRPX2O60687 465 aaPredicted RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 SLC25A12O75746 678 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 KRT33AO76009 404 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 SLC22A5O76082 557 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 UTS2O95399 124 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 CFDP00746 253 aaPredicted RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 GUSBP08236 651 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 ASAH2BP0C7U1 165 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 PSMB1P20618 241 aaKnown RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 P2RX1P51575 399 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 ZNF134P52741 427 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 EFNA3P52797 238 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 SLC37A1P57057 533 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 RPL23AP62750 156 aaKnown RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 ALKBH1Q13686 389 aaKnown RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 LINC00303Q3SY05 128 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 Q499Y3 187 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 RFPL4BQ6ZWI9 263 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 BHLHA15Q7RTS1 189 aaPredicted RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 SLC16A9Q7RTY1 509 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 LRRC75A-AS1Q8N1F1 130 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 OR5D13Q8NGL4 314 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 ZNF563Q8TA94 476 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 GPX8Q8TED1 209 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 THEM6Q8WUY1 208 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 MRGPRFQ96AM1 343 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 RAB40CQ96S21 281 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 TPSD1Q9BZJ3 242 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 DUSP15Q9H1R2 295 aaPredicted RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 UBQLN4Q9NRR5 601 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 CA10Q9NS85 328 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 KIAA1456Q9P272 454 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 PUS1Q9Y606 427 aaKnown RBP eCLIP7.92□□□□□ -1.14
FN1-227ENST00000498719 FREM2Q5SZK8 3169 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 CIB4A0PJX0 185 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 C10orf142B7Z368 130 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 PDCD5O14737 125 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 ZNF749O43361 778 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 ICOSLGO75144 302 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 PROS1P07225 676 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 PNMTP11086 282 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 CD80P33681 288 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 CAPZBP47756 277 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 GABRA4P48169 554 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 HSD11B2P80365 405 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 ISXQ2M1V0 245 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 BAIAP2L2Q6UXY1 529 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 TTLL10Q6ZVT0 673 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 SLC35D2Q76EJ3 337 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 FAM220AQ7Z4H9 259 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 GPAT4Q86UL3 456 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 PRSS58Q8IYP2 241 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 DND1Q8IYX4 353 aaKnown RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 PRSS35Q8N3Z0 413 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 FCAMRQ8WWV6 532 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 HGDQ93099 445 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 TMEM106AQ96A25 262 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 S100A16Q96FQ6 103 aaKnown RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 C7orf50Q9BRJ6 194 aaKnown RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 MRPL13Q9BYD1 178 aaKnown RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 SLC19A3Q9BZV2 496 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 ZNF436Q9C0F3 470 aaPredicted RBP7.92□□□□□ -1.14
FN1-227ENST00000498719 ZNF160Q9HCG1 818 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 PTTG3PQ9NZH4 202 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 KCNG2Q9UJ96 466 aa7.92□□□□□ -1.14
FN1-227ENST00000498719 SRFP11831 508 aa7.91□□□□□ -1.14
FN1-227ENST00000498719 PNLIPP16233 465 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms