RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	NXF2	Q9GZY0	626 aa	Known RBP	4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	COMMD4	Q9H0A8	199 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	DEFB127	Q9H1M4	99 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	C1orf198	Q9H425	327 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PRDM13	Q9H4Q3	707 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	NIPAL2	Q9H841	368 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RNF122	Q9H9V4	155 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM165	Q9HC07	324 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SNTG1	Q9NSN8	517 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ACOXL	Q9NUZ1	547 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MRPL22	Q9NWU5	206 aa	Known RBP	4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	EMC3	Q9P0I2	261 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	LUZP4	Q9P127	313 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MRM2	Q9UI43	246 aa	Known RBP	4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	POLR1D	Q9Y2S0	133 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	FLVCR1	Q9Y5Y0	555 aa		4.65	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ATR	Q13535	2644 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	IGKV3D-15	A0A087WSY6	115 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM212	A6NML5	194 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF716	A6NP11	495 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF879	B4DU55	563 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325		H0YC42	278 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MKRN2OS	H3BPM6	223 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PSMD9	O00233	223 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PDCD5	O14737	125 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MAGEB4	O15481	346 aa	Predicted RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM127	O75204	238 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MRPL33	O75394	65 aa	Known RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	UPK3A	O75631	287 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	KRT33A	O76009	404 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MPZL1	O95297	269 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GPANK1	O95872	356 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	IGHG3	P01860	377 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	APOC1	P02654	83 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	NPR2	P20594	1047 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MSR1	P21757	451 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MAPK3	P27361	379 aa	Predicted RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CD40LG	P29965	261 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SDC2	P34741	201 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TGFBR1	P36897	503 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PSMB10	P40306	273 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SRY	Q05066	204 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MXD1	Q05195	221 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF169	Q14929	603 aa	Predicted RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TAF13	Q15543	124 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	STK11	Q15831	433 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SGCA	Q16586	387 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	HSD17B12	Q53GQ0	312 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM244	Q5VVB8	128 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ABLIM2	Q6H8Q1	611 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RPUSD3	Q6P087	351 aa	Known RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	UNQ9370/PRO34162	Q6UXP9	181 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM91	Q6ZNR0	172 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	FOXL2NB	Q6ZUU3	175 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325		Q71RC1	249 aa	Predicted RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TRIL	Q7L0X0	811 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	DCXR	Q7Z4W1	244 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM123	Q8N131	208 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RFLNB	Q8N5W9	214 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF676	Q8N7Q3	588 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZIC4	Q8N9L1	334 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325		Q8NA96	180 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GJC3	Q8NFK1	279 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	OR6Q1	Q8NGQ2	317 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	OR5AK2	Q8NH90	309 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RPS4Y2	Q8TD47	263 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RNF128	Q8TEB7	428 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ACOT12	Q8WYK0	555 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLC25A46	Q96AG3	418 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM45B	Q96B21	275 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SARAF	Q96BY9	339 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLAMF6	Q96DU3	332 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TRMT61A	Q96FX7	289 aa	Known RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	WDYHV1	Q96HA8	205 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PGLYRP3	Q96LB9	341 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CEP19	Q96LK0	163 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CLUHP3	Q96NS8	147 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	FOXN4	Q96NZ1	517 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF385A	Q96PM9	386 aa	Known RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	WAC	Q9BTA9	647 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLIRP	Q9GZT3	109 aa	Known RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLITRK2	Q9H156	845 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TPK1	Q9H3S4	243 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RNF167	Q9H6Y7	350 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZDHHC11	Q9H8X9	412 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ELOVL3	Q9HB03	270 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SMURF1	Q9HCE7	757 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	AKIP1	Q9NQ31	210 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	POLE4	Q9NR33	117 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CENPM	Q9NSP4	180 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLCO1C1	Q9NYB5	712 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	NPAP1	Q9NZP6	1156 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CYB5R1	Q9UHQ9	305 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CAMK2A	Q9UQM7	478 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	KLHDC2	Q9Y2U9	406 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	NOSIP	Q9Y314	301 aa	Known RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GRIP1	Q9Y3R0	1128 aa		4.64	□□□□□ -1.67

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