RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ISYNA1Q9NPH2 558 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 IGHV1-18A0A0C4DH31 117 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 CD300LBA8K4G0 201 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 GMDSO60547 372 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 MT-ND2P03891 347 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 POU3F4P49335 361 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SRSF1Q07955 248 aaKnown RBP eCLIP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 PHYHD1Q5SRE7 291 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SPATA46Q5T0L3 261 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 OR2T2Q6IF00 324 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 LSRQ86X29 649 aaPredicted RBP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 OR2Z1Q8NG97 314 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 AP3S1Q92572 193 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 MRPL24Q96A35 216 aaKnown RBP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ADAT1Q9BUB4 502 aaKnown RBP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 GPR84Q9NQS5 396 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 PURGQ9UJV8 347 aaKnown RBP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 LHFPL6Q9Y693 200 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 CLDN25C9JDP6 229 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 P2RY10O00398 339 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 NRASP01111 189 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 RNF224P0DH78 156 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 TALDO1P37837 337 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 GNG3P63215 75 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ROM1Q03395 351 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SCGB2A2Q13296 93 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SNTB1Q13884 538 aaKnown RBP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ARL6IP1Q15041 203 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 TBCEQ15813 527 aaPredicted RBP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 CROCCP3Q8IVE0 287 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF101Q8IZC7 436 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 WDR31Q8NA23 367 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 RAB39BQ96DA2 213 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 PIMREGQ9BSJ6 248 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ERVK-18Q9QC07 812 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ING1Q9UK53 422 aaPredicted RBP7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ITGB1BP2Q9UKP3 347 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 UGT2A1Q9Y4X1 527 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 INTS1Q8N201 2190 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 hCG_1809904A0A1W2PP81 198 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 A0A1W2PPE2 198 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 A0A1W2PR64 198 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 A0A1W2PRV1 198 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 DHRS3O75911 302 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 RGS9O75916 674 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 IGKV3-15P01624 115 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 TMEM225BP0DP42 221 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 GAAP10253 952 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 CCL2P13500 99 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 RPS27P42677 84 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 BLMHQ13867 455 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF672Q499Z4 452 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 OR51E1Q8TCB6 317 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 URM1Q9BTM9 101 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 CST11Q9H112 138 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 DDX28Q9NUL7 540 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 IL19Q9UHD0 177 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 UTP20O75691 2785 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 A0A0U1RQV5 110 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 TMEM210A6NLX4 147 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF780AO75290 641 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 EPHA2P29317 976 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 INPP1P49441 399 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 MLLT11Q13015 90 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 RSU1Q15404 277 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 TSTQ16762 297 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 Q499Y3 187 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 LHFPL2Q6ZUX7 228 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 BCDIN3DQ7Z5W3 292 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 Q8IYB0 196 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 MUC20Q8N307 709 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 BHLHE23Q8NDY6 225 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 SPSB1Q96BD6 273 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF524Q96C55 264 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 MS4A3Q96HJ5 214 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 KCTD7Q96MP8 289 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 BEX4Q9NWD9 120 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 SLC22A13Q9Y226 551 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 UNC79Q9P2D8 2635 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 LOC100506127A0A0U1RQW1 187 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 LOC107986453A0A1B0GWG9 222 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 FAM230AA0A1W2PPH8 454 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 METTL21EPA6NDL7 271 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 GPR6P46095 362 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 OR8B8Q15620 311 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 CDONQ4KMG0 1287 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 ELMOD2Q8IZ81 293 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 SPICQ8N5J4 248 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 OR56B2PQ8NGI1 322 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 OR2G2Q8NGZ5 317 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 HTRA1Q92743 480 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 POM121L2Q96KW2 1035 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 TMED9Q9BVK6 235 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 CACNG6Q9BXT2 260 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 SNTG1Q9NSN8 517 aa7.47□□□□□ -1.21
U2AF1-212ENST00000496462 MRPS18AQ9NVS2 196 aaKnown RBP7.47□□□□□ -1.21
U2AF1-212ENST00000496462 ANKRD61A6NGH8 418 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 PPIHO43447 177 aaKnown RBP7.46□□□□□ -1.21
U2AF1-212ENST00000496462 ACSM4P0C7M7 580 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms