RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 SERPINA3P01011 423 aa13.54□□□□□ -0.24
PHF1-211ENST00000495509 ZNF182P17025 639 aaPredicted RBP13.54□□□□□ -0.24
PHF1-211ENST00000495509 HLXQ14774 488 aaPredicted RBP13.54□□□□□ -0.24
PHF1-211ENST00000495509 Q499Y3 187 aa13.54□□□□□ -0.24
PHF1-211ENST00000495509 RFPL4BQ6ZWI9 263 aa13.54□□□□□ -0.24
PHF1-211ENST00000495509 OR1J2Q8NGS2 313 aa13.54□□□□□ -0.24
PHF1-211ENST00000495509 TSEN15Q8WW01 171 aaKnown RBP13.54□□□□□ -0.24
PHF1-211ENST00000495509 APOBEC3DQ96AK3 386 aaPredicted RBP13.54□□□□□ -0.24
PHF1-211ENST00000495509 REEP6Q96HR9 211 aa13.54□□□□□ -0.24
PHF1-211ENST00000495509 DERL3Q96Q80 235 aa13.54□□□□□ -0.24
PHF1-211ENST00000495509 PLCE1Q9P212 2302 aa13.54□□□□□ -0.24
PHF1-211ENST00000495509 A0A1B0GVI7 797 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 GALP22466 123 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 CALRP27797 417 aaKnown RBP13.53□□□□□ -0.24
PHF1-211ENST00000495509 ERVS71-1P61550 626 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 NAAAQ02083 359 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 SPATA46Q5T0L3 261 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 ZNF808Q8N4W9 903 aaPredicted RBP13.53□□□□□ -0.24
PHF1-211ENST00000495509 OR13C3Q8NGS6 347 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 TMEM106AQ96A25 262 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 FGGYQ96C11 551 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 NPDC1Q9NQX5 325 aaPredicted RBP13.53□□□□□ -0.24
PHF1-211ENST00000495509 DHDHQ9UQ10 334 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 TRBV5-7A0A0A0MS05 114 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 SMPD2O60906 423 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 GATBO75879 557 aaKnown RBP13.53□□□□□ -0.24
PHF1-211ENST00000495509 UCHL1P09936 223 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 CLEC2LP0C7M8 214 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 RNF224P0DH78 156 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 AGAP20933 346 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 CCL1P22362 96 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 UCP2P55851 309 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 SPOCK1Q08629 439 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 TNK1Q13470 666 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 PLPP7Q8NBV4 271 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 OR14K1Q8NGZ2 314 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 KCTD7Q96MP8 289 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 SP140LQ9H930 580 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 PTTG3PQ9NZH4 202 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 EIF3KQ9UBQ5 218 aaKnown RBP13.53□□□□□ -0.24
PHF1-211ENST00000495509 GSTK1Q9Y2Q3 226 aa13.53□□□□□ -0.24
PHF1-211ENST00000495509 SMIM30A4D0T7 59 aa13.52□□□□□ -0.25
PHF1-211ENST00000495509 DPRXA6NFQ7 191 aa13.52□□□□□ -0.25
PHF1-211ENST00000495509 PPP3CBP16298 524 aa13.52□□□□□ -0.25
PHF1-211ENST00000495509 ACKR3P25106 362 aa13.52□□□□□ -0.25
PHF1-211ENST00000495509 SDC2P34741 201 aa13.52□□□□□ -0.25
PHF1-211ENST00000495509 GK2Q14410 553 aaPredicted RBP13.52□□□□□ -0.25
PHF1-211ENST00000495509 DOK3Q7L591 496 aa13.52□□□□□ -0.25
PHF1-211ENST00000495509 ADAT3Q96EY9 351 aaPredicted RBP13.52□□□□□ -0.25
PHF1-211ENST00000495509 ZNF275Q9NSD4 429 aaPredicted RBP13.52□□□□□ -0.25
PHF1-211ENST00000495509 UBR5O95071 2799 aaPredicted RBP13.52□□□□□ -0.25
PHF1-211ENST00000495509 TRAV8-7A0A075B6U6 113 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 SLC22A1O15245 554 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 CDRT1O95170 752 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 CD40P25942 277 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 RPS19P39019 145 aaKnown RBP13.51□□□□□ -0.25
PHF1-211ENST00000495509 SERPINB10P48595 397 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 GSK3AP49840 483 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 FAM3AP98173 230 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 MXD1Q05195 221 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 C3orf36Q3SXR2 165 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 DMRTC1Q5HYR2 192 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 C1QTNF12Q5T7M4 302 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 SPSB4Q96A44 273 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 LRRC46Q96FV0 321 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 DCSTAMPQ9H295 470 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 TPK1Q9H3S4 243 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 MOV10Q9HCE1 1003 aaKnown RBP13.51□□□□□ -0.25
PHF1-211ENST00000495509 V9GYS6 101 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 DOPEY1Q5JWR5 2465 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 ABCA4P78363 2273 aa13.51□□□□□ -0.25
PHF1-211ENST00000495509 XRCC2O43543 280 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 ICMTO60725 284 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 SRMP19623 302 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 PPP1CBP62140 327 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 DCTN2Q13561 401 aaKnown RBP13.5□□□□□ -0.25
PHF1-211ENST00000495509 HSD17B12Q53GQ0 312 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 OR1J1Q8NGS3 322 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 TBC1D15Q8TC07 691 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 REPIN1Q9BWE0 567 aaKnown RBP13.5□□□□□ -0.25
PHF1-211ENST00000495509 OR2J1Q9GZK6 312 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 NDRG3Q9UGV2 375 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 hCG_38984A0A1B0GV85 526 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 ATP6V1G2-DDX39BF2Z307 99 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 C19orf84I3L1E1 186 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 DHRS3O75911 302 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 NCR1O76036 304 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 CRYAAP02489 173 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 FAHP16930 419 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 CAV3P56539 151 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 SORDQ00796 357 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 BSPH1Q075Z2 132 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 SRSF1Q07955 248 aaKnown RBP eCLIP13.5□□□□□ -0.253e-6■■■■□ 24
PHF1-211ENST00000495509 MALLQ13021 153 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 PAMR1Q6UXH9 720 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 Q6ZSR3 168 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 USP43Q70EL4 1123 aa13.5□□□□□ -0.25
PHF1-211ENST00000495509 NR2C2APQ86WQ0 139 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms