RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZNF133P52736 654 aaPredicted RBP10.21□□□□□ -0.78
RFC4-214ENST00000494047 CLDN6P56747 220 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 GABREP78334 506 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 MELKQ14680 651 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 DEFB133Q30KQ1 61 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 GFOD2Q3B7J2 385 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 ASPHD2Q6ICH7 369 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 DRAM2Q6UX65 266 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 IL34Q6ZMJ4 242 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 DBX2Q6ZNG2 339 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 HOGA1Q86XE5 327 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 SFTPA2Q8IWL1 248 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 SVBPQ8N300 66 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 CHST4Q8NCG5 386 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 OR4K17Q8NGC6 315 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 TERB2Q8NHR7 220 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 RNF141Q8WVD5 230 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 PPP1R1CQ8WVI7 109 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 ST8SIA4Q92187 359 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 ARL11Q969Q4 196 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 FBXW5Q969U6 566 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 INTS12Q96CB8 462 aaKnown RBP10.21□□□□□ -0.78
RFC4-214ENST00000494047 OXGR1Q96P68 337 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 OCSTAMPQ9BR26 566 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 ZNF471Q9BX82 626 aaPredicted RBP10.21□□□□□ -0.78
RFC4-214ENST00000494047 TMEM59Q9BXS4 323 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 MRPL13Q9BYD1 178 aaKnown RBP10.21□□□□□ -0.78
RFC4-214ENST00000494047 TINAGL1Q9GZM7 467 aaPredicted RBP10.21□□□□□ -0.78
RFC4-214ENST00000494047 CNTD2Q9H8S5 307 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 CHMP1AQ9HD42 196 aaPredicted RBP10.21□□□□□ -0.78
RFC4-214ENST00000494047 C12orf4Q9NQ89 552 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 TAS2R3Q9NYW6 316 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 KLRF1Q9NZS2 232 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 DHCR7Q9UBM7 475 aaKnown RBP10.21□□□□□ -0.78
RFC4-214ENST00000494047 ZNF391Q9UJN7 358 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 PRELID1Q9Y255 219 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 WIF1Q9Y5W5 379 aa10.21□□□□□ -0.78
RFC4-214ENST00000494047 TDRD6O60522 2096 aaKnown RBP10.2□□□□□ -0.78
RFC4-214ENST00000494047 TRAV14DV4A0A0A6YYC5 116 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 PIGBOS1A0A0B4J2F0 54 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 A0A0U1RQV5 110 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 MED19A0JLT2 244 aaPredicted RBP10.2□□□□□ -0.78
RFC4-214ENST00000494047 TMEM235A6NFC5 223 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 FIGNL2A6NMB9 653 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 DBX1A6NMT0 343 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 ABCD4O14678 606 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 ALOX12BO75342 701 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 TSPAN9O75954 239 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 CRHP06850 196 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 LYL1P12980 280 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 HIST1H1DP16402 221 aaKnown RBP10.2□□□□□ -0.78
RFC4-214ENST00000494047 ENPP1P22413 925 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 IL32P24001 234 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 THBS4P35443 961 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 EMP2P54851 167 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 SLC35A1P78382 337 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 QRFPP83859 136 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 DBPQ10586 325 aaPredicted RBP10.2□□□□□ -0.78
RFC4-214ENST00000494047 ECH1Q13011 328 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 NKAPLQ5M9Q1 402 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 DCAF12L2Q5VW00 463 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 C1QL3Q5VWW1 255 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 TMEM71Q6P5X7 295 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 ANKRD37Q7Z713 158 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 GLRX5Q86SX6 157 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 ZNF101Q8IZC7 436 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 SLC38A6Q8IZM9 456 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 ARMC10Q8N2F6 343 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 OR4K15Q8NH41 348 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 STT3BQ8TCJ2 826 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 RHBDD1Q8TEB9 315 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 C11orf40Q8WZ69 217 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 MARC2Q969Z3 335 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 RAB3CQ96E17 227 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 LINC00052Q96N35 136 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 SLC6A7Q99884 636 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 SLC26A1Q9H2B4 701 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 TMEM185BQ9H7F4 350 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 FSCN3Q9NQT6 498 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 CENPMQ9NSP4 180 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 CGGBP1Q9UFW8 167 aaPredicted RBP10.2□□□□□ -0.78
RFC4-214ENST00000494047 EDARQ9UNE0 448 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 FARSAQ9Y285 508 aaKnown RBP10.2□□□□□ -0.78
RFC4-214ENST00000494047 RHBDD3Q9Y3P4 386 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 POMT1Q9Y6A1 747 aa10.2□□□□□ -0.78
RFC4-214ENST00000494047 TPRP12270 2363 aaKnown RBP10.19□□□□□ -0.78
RFC4-214ENST00000494047 ZNF726A6NNF4 738 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 F5H0A9 414 aaPredicted RBP10.19□□□□□ -0.78
RFC4-214ENST00000494047 F8VVB4 439 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 F8VWA3 439 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 M0QYG6 137 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 P2RY10O00398 339 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 SIX6O95475 246 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 FBXO45P0C2W1 286 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 PGA4P0DJD7 388 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 PGA3P0DJD8 388 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 VSIG8P0DPA2 414 aa10.19□□□□□ -0.78
RFC4-214ENST00000494047 ATF4P18848 351 aaPredicted RBP10.19□□□□□ -0.78
RFC4-214ENST00000494047 RPS27P42677 84 aaKnown RBP10.19□□□□□ -0.78
RFC4-214ENST00000494047 BIDP55957 195 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms