RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TTRP02766 147 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 ART1P52961 327 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 SLC3A1Q07837 685 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 MRPL28Q13084 256 aaKnown RBP14.76□□□□□ -0.05
LIME1-208ENST00000493265 GK2Q14410 553 aaPredicted RBP14.76□□□□□ -0.05
LIME1-208ENST00000493265 TBCEQ15813 527 aaPredicted RBP14.76□□□□□ -0.05
LIME1-208ENST00000493265 NEDD8Q15843 81 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 ALKBH6Q3KRA9 238 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 PGAP1Q75T13 922 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 ELMOD2Q8IZ81 293 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 RDH10Q8IZV5 341 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 ZNF676Q8N7Q3 588 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 SYNPRQ8TBG9 265 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 KLF14Q8TD94 323 aaPredicted RBP14.76□□□□□ -0.05
LIME1-208ENST00000493265 FBXW5Q969U6 566 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 MARS2Q96GW9 593 aaKnown RBP14.76□□□□□ -0.05
LIME1-208ENST00000493265 FAM71F1Q96KD3 344 aaPredicted RBP14.76□□□□□ -0.05
LIME1-208ENST00000493265 COG8Q96MW5 612 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 GPR84Q9NQS5 396 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 ST6GALNAC2Q9UJ37 374 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 RTTNQ86VV8 2226 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 TRIM64A6NGJ6 449 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 J3QW42 95 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 HS3ST1O14792 307 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 TGM4P49221 684 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 CDK5R1Q15078 307 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 ADIPOQQ15848 244 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 RPL22L1Q6P5R6 122 aaKnown RBP14.75□□□□□ -0.05
LIME1-208ENST00000493265 KCTD8Q6ZWB6 473 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 ZNF367Q7RTV3 350 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 OR5AS1Q8N127 324 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 BHLHE23Q8NDY6 225 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 NRGNQ92686 78 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 LYZL4Q96KX0 146 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 DHRS9Q9BPW9 319 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 PDCD1LG2Q9BQ51 273 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 SOX7Q9BT81 388 aa14.75□□□□□ -0.05
LIME1-208ENST00000493265 MRPL37Q9BZE1 423 aaKnown RBP14.75□□□□□ -0.05
LIME1-208ENST00000493265 CADP27708 2225 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 A0A1B0GVI7 797 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 A0A1W2PPW3 197 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 FAM221AA4D161 298 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 GGT3PA6NGU5 568 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 OR4C45A6NMZ5 311 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 TIMM8AO60220 97 aaPredicted RBP14.74□□□□□ -0.05
LIME1-208ENST00000493265 CELP19835 753 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 PCMT1P22061 227 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 PSMB9P28065 219 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 APOBEC3AP31941 199 aaPredicted RBP14.74□□□□□ -0.05
LIME1-208ENST00000493265 SERPINF1P36955 418 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 KLF3P57682 345 aaPredicted RBP14.74□□□□□ -0.05
LIME1-208ENST00000493265 TAS2R43P59537 309 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 OR2T2Q6IF00 324 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 FDX2Q6P4F2 183 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 EGFL6Q8IUX8 553 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 FBXL14Q8N1E6 418 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 OR5AK2Q8NH90 309 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 MRPL24Q96A35 216 aaKnown RBP14.74□□□□□ -0.05
LIME1-208ENST00000493265 COMMD4Q9H0A8 199 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 PLK3Q9H4B4 646 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 ZNF442Q9H7R0 627 aa14.74□□□□□ -0.05
LIME1-208ENST00000493265 MYEF2Q9P2K5 600 aaKnown RBP14.74□□□□□ -0.05
LIME1-208ENST00000493265 A0A0U1RQV5 110 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 LOC107986453A0A1B0GWG9 222 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 MAGEA13PA6NCF6 341 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 OGG1O15527 345 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 INMTO95050 263 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 ZFPL1O95159 310 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 CCR9P51686 369 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 SELENOVP59797 346 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 PSG7Q13046 419 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 CCDC58Q4VC31 144 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 MBNL2Q5VZF2 373 aaKnown RBP14.73□□□□□ -0.05
LIME1-208ENST00000493265 FBXW12Q6X9E4 464 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 C1orf174Q8IYL3 243 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 HAVCR2Q8TDQ0 301 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 POM121Q96HA1 1249 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 MGLLQ99685 303 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 TAAR3PQ9P1P4 343 aa14.73□□□□□ -0.05
LIME1-208ENST00000493265 TMEM212A6NML5 194 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 SYT7O43581 403 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 UBCP0CG48 685 aaKnown RBP14.72□□□□□ -0.05
LIME1-208ENST00000493265 RAC2P15153 192 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 ZNF250P15622 560 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 TUBG1P23258 451 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 CFL1P23528 166 aaKnown RBP14.72□□□□□ -0.05
LIME1-208ENST00000493265 TTKP33981 857 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 GSK3AP49840 483 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 FAM3AP98173 230 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 TSTQ16762 297 aaKnown RBP14.72□□□□□ -0.05
LIME1-208ENST00000493265 NKPD1Q17RQ9 610 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 KRTAP21-3Q3LHN1 58 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 ARMCX4Q5H9R4 360 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 TMEM255AQ5JRV8 349 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 TMEM244Q5VVB8 128 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 UBE2UQ5VVX9 321 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 LIPKQ5VXJ0 399 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 DMKNQ6E0U4 476 aaPredicted RBP14.72□□□□□ -0.05
LIME1-208ENST00000493265 MUC15Q8N387 334 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 OR56B2PQ8NGI1 322 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms