RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 GLDNQ6ZMI3 551 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 Q6ZTK2 550 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 KCTD20Q7Z5Y7 419 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 IQCF2Q8IXL9 164 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 OR6K3Q8NGY3 331 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 LINC01560Q8TB33 94 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 C15orf40Q8WUR7 153 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 ELMOD3Q96FG2 381 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 DERL3Q96Q80 235 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CHIAQ9BZP6 476 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 LIN7BQ9HAP6 207 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 MEPEQ9NQ76 525 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 MRPL15Q9P015 296 aaKnown RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 KLHL13Q9P2N7 655 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 PROCRQ9UNN8 238 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 FLVCR2Q9UPI3 526 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 APCP25054 2843 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 PLSCR5A0PG75 271 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 IFITM5A6NNB3 132 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ZNF716A6NP11 495 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ARPC1BO15143 372 aaKnown RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 TSPAN9O75954 239 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 NFYAP23511 347 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 FKBP2P26885 142 aaKnown RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 KRTAP10-9P60411 292 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 RPS11P62280 158 aaKnown RBP eCLIP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 CSNK2A1P68400 391 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 RASGEF1BQ0VAM2 473 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 RNPS1Q15287 305 aaKnown RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ABLIM2Q6H8Q1 611 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 C22orf34Q6ZV56 151 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 OR52E2Q8NGJ4 325 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 OR52I2Q8NH67 350 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ZMYND19Q96E35 227 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 S100A16Q96FQ6 103 aaKnown RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ZNF559Q9BR84 538 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 TMPRSS13Q9BYE2 586 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 POTEKPQ9BYX7 375 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 TTTY10Q9BZA0 68 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 EVA1AQ9H8M9 152 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 BCO1Q9HAY6 547 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 NOX3Q9HBY0 568 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 GLRX2Q9NS18 164 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 MED9Q9NWA0 146 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 SDHAF2Q9NX18 166 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 CRIM1Q9NZV1 1036 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ZNF69Q9UC07 566 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 GNG8Q9UK08 70 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 EMC9Q9Y3B6 208 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 IGKV1D-42A0A075B6H8 117 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 LIPT2A6NK58 231 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 A8MVM7 634 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 SNRPGP15A8MWD9 76 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 TSPAN4O14817 238 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 HRGP04196 525 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 NUP62P37198 522 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 RBM34P42696 430 aaKnown RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 PSMA6P60900 246 aaKnown RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 LGALS3BPQ08380 585 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 GGTLC2Q14390 218 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 TMEM69Q5SWH9 247 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 OLFML2AQ68BL7 652 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 SLC35F2Q8IXU6 374 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 RFLNBQ8N5W9 214 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 MOSPD2Q8NHP6 518 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 RAB40AQ8WXH6 277 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 KTI12Q96EK9 354 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 ARPC5LQ9BPX5 153 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 PDCD1LG2Q9BQ51 273 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 AIFM2Q9BRQ8 373 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 PTDSS2Q9BVG9 487 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 NOX4Q9NPH5 578 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 TAS2R5Q9NYW4 299 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-219ENST00000491747 FBXL3Q9UKT7 428 aa8.26□□□□□ -1.09
BRCA1-219ENST00000491747 HRNRQ86YZ3 2850 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-219ENST00000491747 A0A0B4J2E0 115 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 A0A1B0GX12 115 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 ANKRD20A5PA0PJZ0 165 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 KRBOX1C9JBD0 128 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 AKR7A3O95154 331 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 CCKARP32238 428 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 P2RY4P51582 365 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 MAP2K6P52564 334 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 OR7A5Q15622 319 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 ALG10BQ5I7T1 473 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 HES5Q5TA89 166 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 C1orf140Q5VVS0 124 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 ZNF626Q68DY1 528 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 FAM122CQ6P4D5 195 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 UNQ9370/PRO34162Q6UXP9 181 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 SDR9C7Q8NEX9 313 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 TNFRSF13CQ96RJ3 184 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 TRIM2Q9C040 744 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 C12orf4Q9NQ89 552 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 ZC4H2Q9NQZ6 224 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 KLK11Q9UBX7 282 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 V9GY05 133 aa8.25□□□□□ -1.09
BRCA1-219ENST00000491747 PDZD2O15018 2839 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms