RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 CLVS1Q8IUQ0 354 aaPredicted RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 PIAS4Q8N2W9 510 aaPredicted RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 RPL3LQ92901 407 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 SPSB4Q96A44 273 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 TRMT61AQ96FX7 289 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 OR14A2Q96R54 314 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 BCL2L14Q9BZR8 327 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 POFUT1Q9H488 388 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 GABRPO00591 440 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 GPX5O75715 221 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 RGS9O75916 674 aaPredicted RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 OCM2P0CE71 109 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 NR4A1P22736 598 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 PPP1CBP62140 327 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 GK2Q14410 553 aaPredicted RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 NCMAPQ5T1S8 102 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 TMEM91Q6ZNR0 172 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 DOK3Q7L591 496 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 ACBD4Q8NC06 268 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 OR1J1Q8NGS3 322 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 AKAP1Q92667 903 aaKnown RBP eCLIP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 PLPPR2Q96GM1 343 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 FAM71F1Q96KD3 344 aaPredicted RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 CHCHD6Q9BRQ6 235 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 RBM38Q9H0Z9 239 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 PTTG3PQ9NZH4 202 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 ENPP5Q9UJA9 477 aa18.73■□□□□ 0.59
VCPKMT-204ENST00000491402 CRYBG3Q68DQ2 2970 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 PLCE1Q9P212 2302 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 TRBV5-5A0A0J9YX44 114 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 CASKO14936 926 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 AIREO43918 545 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 SERPINA3P01011 423 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 GALP22466 123 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 MAGEB1P43366 347 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 ERVS71-1P61550 626 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 Q499Y3 187 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 ACSM3Q53FZ2 586 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 SPATA46Q5T0L3 261 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 PLPP7Q8NBV4 271 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 TSEN15Q8WW01 171 aaKnown RBP18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 EXOSC4Q9NPD3 245 aaKnown RBP18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 CEPT1Q9Y6K0 416 aa18.72■□□□□ 0.59
VCPKMT-204ENST00000491402 LOC100506127A0A0U1RQW1 187 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 TRDV1A0A1B0GX56 115 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 DHRS3O75911 302 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 GABARAPO95166 117 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 PRSS12P56730 875 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 SNTB2Q13425 540 aaKnown RBP18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 HLXQ14774 488 aaPredicted RBP18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 BEX5Q5H9J7 111 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 RADILQ96JH8 1075 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 SPOCK3Q9BQ16 436 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 REPIN1Q9BWE0 567 aaKnown RBP18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 OR2J1Q9GZK6 312 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 BATF3Q9NR55 127 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 SSR3Q9UNL2 185 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 DHDHQ9UQ10 334 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 SPEF1Q9Y4P9 236 aa18.71■□□□□ 0.59
VCPKMT-204ENST00000491402 hCG_38984A0A1B0GV85 526 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 SMIM31A0A1B0GVY4 71 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 ZNF879B4DU55 563 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 SIAH2O43255 324 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 CFL1P23528 166 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 SOX2P48431 317 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 NKX6-1P78426 367 aaPredicted RBP18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 FAM3AP98173 230 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 ZMAT1Q5H9K5 638 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 SLC22A25Q6T423 547 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 Q6ZSR3 168 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 PGAP1Q75T13 922 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 MRPL21Q7Z2W9 205 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 C1orf174Q8IYL3 243 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 OR13C3Q8NGS6 347 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 SLC25A40Q8TBP6 338 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 TMEM106AQ96A25 262 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 OPA3Q9H6K4 179 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 LOC390937A0A1W2PQ73 354 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 MTRF1O75570 445 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 GATBO75879 557 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 HIST2H2BCQ6DN03 193 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 ADAM5Q6NVV9 412 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 CEACAM19Q7Z692 300 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 OR14K1Q8NGZ2 314 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 CENPOQ9BU64 300 aa18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 TXNL4BQ9NX01 149 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-204ENST00000491402 DEFB108AA8MXU0 73 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 LMX1BO60663 402 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 ZNF12P17014 697 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 FGF9P31371 208 aaPredicted RBP18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 TMBIM6P55061 237 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 LSM3P62310 102 aaKnown RBP18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 OR8B8Q15620 311 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 CTF1Q16619 201 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 FAM27D1Q5T7N8 215 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 C22orf42Q6IC83 251 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 UNQ9370/PRO34162Q6UXP9 181 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 FBXW12Q6X9E4 464 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 GDPGP1Q6ZNW5 385 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms