RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 LOC390937A0A1W2PQ73 354 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 P2RY10O00398 339 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 MTRF1O75570 445 aaKnown RBP16.02■□□□□ 0.16
MCF2L-230ENST00000491028 PSMA1P25786 263 aaKnown RBP16.02■□□□□ 0.16
MCF2L-230ENST00000491028 GABRA5P31644 462 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 ERVS71-1P61550 626 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 ZNF92Q03936 586 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 GK2Q14410 553 aaPredicted RBP16.02■□□□□ 0.16
MCF2L-230ENST00000491028 SSX1Q16384 188 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 ODF4Q2M2E3 257 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 YIF1BQ5BJH7 314 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 MBNL2Q5VZF2 373 aaKnown RBP16.02■□□□□ 0.16
MCF2L-230ENST00000491028 Q6ZSR3 168 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 PGAP1Q75T13 922 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 PLPP7Q8NBV4 271 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 THRSPQ92748 146 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 LYZL4Q96KX0 146 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 POFUT1Q9H488 388 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 CA10Q9NS85 328 aa16.02■□□□□ 0.16
MCF2L-230ENST00000491028 LRRK2Q5S007 2527 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 VSTM5A8MXK1 200 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 SYT7O43581 403 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 DHRS3O75911 302 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 RAC2P15153 192 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 SELEP16581 610 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 GCH1P30793 250 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 LIPAP38571 399 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 RPL5P46777 297 aaKnown RBP16.01■□□□□ 0.15
MCF2L-230ENST00000491028 SPATA46Q5T0L3 261 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 KLF14Q8TD94 323 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-230ENST00000491028 GPR148Q8TDV2 347 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 TMEM171Q8WVE6 324 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 PSMG3-AS1Q96PY0 264 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 CMAHPQ9Y471 501 aa16.01■□□□□ 0.15
MCF2L-230ENST00000491028 FAM221AA4D161 298 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 DHRS7CA6NNS2 312 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 SERPINA3P01011 423 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 ZNF250P15622 560 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 THBS4P35443 961 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 FAM3AP98173 230 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 OR8B8Q15620 311 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 ZNF672Q499Z4 452 aaPredicted RBP16■□□□□ 0.15
MCF2L-230ENST00000491028 VHLLQ6RSH7 139 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 RDH10Q8IZV5 341 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 OR13F1Q8NGS4 319 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 RGP1Q92546 391 aaPredicted RBP16■□□□□ 0.15
MCF2L-230ENST00000491028 HAVCR1Q96D42 359 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 FAM71F1Q96KD3 344 aaPredicted RBP16■□□□□ 0.15
MCF2L-230ENST00000491028 SF3B6Q9Y3B4 125 aaKnown RBP16■□□□□ 0.15
MCF2L-230ENST00000491028 V9GYS6 101 aa16■□□□□ 0.15
MCF2L-230ENST00000491028 TRBV5-5A0A0J9YX44 114 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 PLAUP00749 431 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 GALP22466 123 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 TTKP33981 857 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 DDOSTP39656 456 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 MAP2K3P46734 347 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 SELENOVP59797 346 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 RPS25P62851 125 aaKnown RBP15.99■□□□□ 0.15
MCF2L-230ENST00000491028 HLXQ14774 488 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-230ENST00000491028 OR14K1Q8NGZ2 314 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 SYNPRQ8TBG9 265 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 TSEN15Q8WW01 171 aaKnown RBP15.99■□□□□ 0.15
MCF2L-230ENST00000491028 MRPL24Q96A35 216 aaKnown RBP15.99■□□□□ 0.15
MCF2L-230ENST00000491028 C10orf35Q96D05 121 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 TMED9Q9BVK6 235 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 CADP27708 2225 aa15.99■□□□□ 0.15
MCF2L-230ENST00000491028 IGLV3-9A0A075B6K5 115 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 GGT3PA6NGU5 568 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 E7EQL1 145 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 HLA-DPB1P04440 258 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 CD36P16671 472 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 KITLGP21583 273 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 MAPK3P27361 379 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-230ENST00000491028 TGFBR2P37173 567 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 MPV17P39210 176 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 GSK3AP49840 483 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 KLF3P57682 345 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-230ENST00000491028 RPS11P62280 158 aaKnown RBP eCLIP15.98■□□□□ 0.15
MCF2L-230ENST00000491028 Q499Y3 187 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 ZBTB37Q5TC79 503 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 CD200R1LQ6Q8B3 271 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 GPR141Q7Z602 305 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 FTMTQ8N4E7 242 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 CSNK2A3Q8NEV1 391 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 SEMA6DQ8NFY4 1073 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 OR51A4Q8NGJ6 313 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 OR13C3Q8NGS6 347 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 OR10AC1Q8NH08 325 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 LILRB1Q8NHL6 650 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-230ENST00000491028 CMBLQ96DG6 245 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 YIPF6Q96EC8 236 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 DHRS9Q9BPW9 319 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 SOX7Q9BT81 388 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 PLEKHA1Q9HB21 404 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 CISD1Q9NZ45 108 aaKnown RBP15.98■□□□□ 0.15
MCF2L-230ENST00000491028 PLEKHB1Q9UF11 243 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-230ENST00000491028 DHDHQ9UQ10 334 aa15.98■□□□□ 0.15
MCF2L-230ENST00000491028 CD300LBA8K4G0 201 aa15.97■□□□□ 0.15
MCF2L-230ENST00000491028 IQCF6A8MYZ5 107 aa15.97■□□□□ 0.15
MCF2L-230ENST00000491028 SC5DO75845 299 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms