RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 C1QTNF5Q9BXJ0 243 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 RNF121Q9H920 327 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 SP140LQ9H930 580 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 CGGBP1Q9UFW8 167 aaPredicted RBP8.21□□□□□ -1.09
SF3B1-211ENST00000487698 RP1L1Q8IWN7 2480 aaPredicted RBP8.21□□□□□ -1.09
SF3B1-211ENST00000487698 ZGRF1Q86YA3 2104 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 TNFSF13O75888 250 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 UBL3O95164 117 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 PTTG1O95997 202 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 LCATP04180 440 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 GABRA1P14867 456 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 RAB3AP20336 220 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 COX5AP20674 150 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 IGHV1-2P23083 117 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 HTR2CP28335 458 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 PTGER4P35408 488 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 THBS4P35443 961 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 FOXF2Q12947 444 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 PLA2G7Q13093 441 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 TRIM16LQ309B1 348 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 LINC00303Q3SY05 128 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 TBRG1Q3YBR2 411 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 GLYATL3Q5SZD4 288 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 PYHIN1Q6K0P9 492 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF584Q8IVC4 421 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 OR51D1Q8NGF3 324 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 FAM57AQ8TBR7 257 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 RAB40AQ8WXH6 277 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 FAM3DQ96BQ1 224 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 FOXRED1Q96CU9 486 aaPredicted RBP8.21□□□□□ -1.1
SF3B1-211ENST00000487698 C10orf35Q96D05 121 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 HAVCR1Q96D42 359 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF75AQ96N20 296 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 ABHD1Q96SE0 405 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 RGCCQ9H4X1 137 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 METTL17Q9H7H0 456 aaPredicted RBP8.21□□□□□ -1.1
SF3B1-211ENST00000487698 PLEKHA1Q9HB21 404 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF71Q9NQZ8 489 aaPredicted RBP8.21□□□□□ -1.1
SF3B1-211ENST00000487698 RHBDL2Q9NX52 303 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF391Q9UJN7 358 aa8.21□□□□□ -1.1
SF3B1-211ENST00000487698 LOC100289279A0A1B0GTE1 492 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 LDLRAD4O15165 306 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 MTRF1O75570 445 aaKnown RBP8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TOXO94900 526 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 ALX3O95076 343 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CGAP01215 116 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 ERCC1P07992 297 aaPredicted RBP8.2□□□□□ -1.1
SF3B1-211ENST00000487698 FAM87AP0C7U9 286 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CD79AP11912 226 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 EDN3P14138 238 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 POU3F4P49335 361 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 ART1P52961 327 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 DEFA1P59665 94 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 DEFA3P59666 94 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 RAB1AP62820 205 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CXADRP78310 365 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 SCN1BQ07699 218 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TNK1Q13470 666 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 ASAH1Q13510 395 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TMEM53Q6P2H8 277 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CD163Q86VB7 1156 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CDH26Q8IXH8 852 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 JAGN1Q8N5M9 183 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CNEP1R1Q8N9A8 125 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 DTX3Q8N9I9 347 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 POC5Q8NA72 575 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 OR52N4Q8NGI2 321 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 OR4D6Q8NGJ1 314 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 OR2AE1Q8NHA4 323 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 SYNPRQ8TBG9 265 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TRIM63Q969Q1 353 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 SPSB4Q96A44 273 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 REEP6Q96HR9 211 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 SORCS2Q96PQ0 1159 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 NKX3-1Q99801 234 aaPredicted RBP8.2□□□□□ -1.1
SF3B1-211ENST00000487698 SLX1AQ9BQ83 275 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 UQCC2Q9BRT2 126 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CHST5Q9GZS9 411 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 PLSCR4Q9NRQ2 329 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 RABL2AQ9UBK7 228 aaPredicted RBP8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TUBD1Q9UJT1 453 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 RABL2BQ9UNT1 228 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 IGKV1-9A0A0C4DH69 117 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 FIGNL2A6NMB9 653 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CTDSPLO15194 276 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CRHP06850 196 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TPOP07202 933 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 FAHP16930 419 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 ACKR3P25106 362 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 STOMP27105 288 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 MNDAP41218 407 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 ID4P47928 161 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 EFNB2P52799 333 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TGFBR3Q03167 851 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 OR8B8Q15620 311 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 GSG1Q2KHT4 349 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 EIF2S3LQ2VIR3 472 aaKnown RBP8.2□□□□□ -1.1
SF3B1-211ENST00000487698 C2orf76Q3KRA6 126 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 C1orf185Q5T7R7 199 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms